RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR5G3P0C626 314 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 SUMO1P63165 101 aaKnown RBP10.12□□□□□ -0.79
DDX39A-202ENST00000324340 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM256Q8N2U0 113 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 Q8N9W7 124 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 OR4C12Q96R67 309 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-202ENST00000324340 ELOVL1Q9BW60 279 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-202ENST00000324340 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 VPS13CQ709C8 3753 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 NDUFB8O95169 186 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 CRISP2P16562 243 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 RPL27AP46776 148 aaKnown RBP10.11□□□□□ -0.79
DDX39A-202ENST00000324340 ATP5IP56385 69 aaPredicted RBP10.11□□□□□ -0.79
DDX39A-202ENST00000324340 PLGLAQ15195 96 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 TNXAQ16473 311 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 C10orf55Q5SWW7 151 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 FAM78BQ5VT40 261 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 C19orf35Q6ZS72 473 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 NECAP1Q8NC96 275 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 RPUSD4Q96CM3 377 aaKnown RBP10.11□□□□□ -0.79
DDX39A-202ENST00000324340 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
DDX39A-202ENST00000324340 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
DDX39A-202ENST00000324340 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 A6NDX4 124 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 ACTL6BO94805 426 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 CA2P00918 260 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 HNRNPA3P51991 378 aaKnown RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 RHOGP84095 191 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM267Q0VDI3 215 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 ZNF562Q6V9R5 426 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 HAPLN4Q86UW8 402 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 SIGLECL1Q8N7X8 197 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 SRSF12Q8WXF0 261 aaKnown RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 HSPB9Q9BQS6 159 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 RSG1Q9BU20 258 aa10.1□□□□□ -0.79
DDX39A-202ENST00000324340 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
DDX39A-202ENST00000324340 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 TEX22C9J3V5 150 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 H3BUX3 64 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 WT1-ASQ06250 92 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 C2orf83Q53S99 150 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 CST9LP1Q5W188 147 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 WDR73Q6P4I2 378 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 OR4F5Q8NH21 305 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 SMIM12Q96EX1 92 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 OR4F4Q96R69 305 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 MOB4Q9Y3A3 225 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 PAM16Q9Y3D7 125 aa10.09□□□□□ -0.79
DDX39A-202ENST00000324340 ITPR3Q14573 2671 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 MDFIC2A0A1B0GVS7 189 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 PRSS46E5RG02 174 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 ZNF253O75346 499 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 RNASE2P10153 161 aaKnown RBP10.08□□□□□ -0.8
DDX39A-202ENST00000324340 NPY1RP25929 384 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 ADMP35318 185 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 IER3P46695 156 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 FGF8P55075 233 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-202ENST00000324340 CX3CL1P78423 397 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 ERHP84090 104 aaKnown RBP10.08□□□□□ -0.8
DDX39A-202ENST00000324340 FXYD3Q14802 87 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 PVRIGQ6DKI7 326 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 Q6YL49 198 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 RPP25LQ8N5L8 163 aaKnown RBP10.08□□□□□ -0.8
DDX39A-202ENST00000324340 STPG4Q8N801 248 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 ZNF114Q8NC26 417 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 TXN2Q99757 166 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 VSIRQ9H7M9 311 aa10.08□□□□□ -0.8
DDX39A-202ENST00000324340 TNCP24821 2201 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 NUPR1O60356 82 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 HYPMO75409 117 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 AMY1AP04745 511 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 GPX1P07203 203 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 GNB1P62873 340 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 BATFQ16520 125 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
DDX39A-202ENST00000324340 SPATA45Q537H7 98 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms