RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MGAT4CQ9UBM8 478 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 RYR1P21817 5038 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 IGLL5B9A064 214 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 K7EQG2 157 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 GOSR2O14653 212 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 PITX3O75364 302 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 ADAP1O75689 374 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 SIX6O95475 246 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 MIFP14174 115 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 CRYBB3P26998 211 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
RPP40-201ENST00000319533 STHQ8IWL8 128 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
RPP40-201ENST00000319533 ST6GAL2Q96JF0 529 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 CIB3Q96Q77 187 aaPredicted RBP10.31□□□□□ -0.76
RPP40-201ENST00000319533 METTL26Q96S19 204 aa10.31□□□□□ -0.76
RPP40-201ENST00000319533 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 A0A1W2PS18 150 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 IFNA21P01568 189 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 IGLC1P0CG04 106 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 SPP1P10451 314 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 IAPPP10997 89 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 NPPCP23582 126 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 OR10J1P30954 320 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 RAB11AP62491 216 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 RPP30P78346 268 aaKnown RBP10.3□□□□□ -0.76
RPP40-201ENST00000319533 TIGITQ495A1 244 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 CSNK1G2-AS1Q8NCQ2 148 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 Q8WTZ3 238 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 ACY3Q96HD9 319 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 X6R8D5 127 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 AGRNO00468 2067 aa10.3□□□□□ -0.76
RPP40-201ENST00000319533 IGKV1-17P01599 117 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 H2BFSP57053 126 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
RPP40-201ENST00000319533 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 NPIPB3Q92617 1050 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 SLC35E1Q96K37 410 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
RPP40-201ENST00000319533 PAIP2BQ9ULR5 123 aaKnown RBP10.29□□□□□ -0.76
RPP40-201ENST00000319533 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 SYNGR2O43760 224 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 C4BPBP20851 252 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 GPX4P36969 197 aaPredicted RBP10.28□□□□□ -0.76
RPP40-201ENST00000319533 YPEL3P61236 119 aaPredicted RBP10.28□□□□□ -0.76
RPP40-201ENST00000319533 Q6ZTC4 211 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 LINC00336Q6ZUF6 198 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 AKAP14Q86UN6 197 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 U3KQE9 123 aa10.28□□□□□ -0.76
RPP40-201ENST00000319533 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 ELOA3CA0A087WX78 387 aaPredicted RBP10.27□□□□□ -0.77
RPP40-201ENST00000319533 G3V3Q6 166 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 WRBO00258 174 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 P2RY1P47900 373 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 STXBP6Q8NFX7 210 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 PKD1P98161 4303 aa10.27□□□□□ -0.77
RPP40-201ENST00000319533 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 A6NJY4 79 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 ZFP92A6NM28 416 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 BOLA2-SMG1P6H3BVE0 249 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 CCNKO75909 580 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 TOMM40O96008 361 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 FABP1P07148 127 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 RD3LP0DJH9 198 aa10.26□□□□□ -0.77
RPP40-201ENST00000319533 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
RPP40-201ENST00000319533 FAM25EA8MYX2 175 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 PFDN1O60925 122 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 AMBPP02760 352 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 IL4P05112 153 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 HNRNPCP07910 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
RPP40-201ENST00000319533 NKX2-1P43699 371 aaPredicted RBP10.25□□□□□ -0.77
RPP40-201ENST00000319533 GAMTQ14353 236 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 Q5BKY6 102 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 SPANXN5Q5MJ07 72 aa10.25□□□□□ -0.77
RPP40-201ENST00000319533 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
RPP40-201ENST00000319533 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
RPP40-201ENST00000319533 ID3Q02535 119 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 IAH1Q2TAA2 248 aaPredicted RBP10.24□□□□□ -0.77
RPP40-201ENST00000319533 C12orf74Q32Q52 190 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 OR51G1Q8NGK1 321 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 RAB40CQ96S21 281 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
RPP40-201ENST00000319533 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
RPP40-201ENST00000319533 C5orf51A6NDU8 294 aa10.23□□□□□ -0.77
RPP40-201ENST00000319533 HELTA6NFD8 242 aa10.23□□□□□ -0.77
RPP40-201ENST00000319533 H3BP45 60 aa10.23□□□□□ -0.77
RPP40-201ENST00000319533 SSSCA1O60232 199 aa10.23□□□□□ -0.77
RPP40-201ENST00000319533 SCGB1D2O95969 90 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms