RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 SSX7Q7RTT5 188 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 SCRT1Q9BWW7 348 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 RPRMQ9NS64 109 aa11.77□□□□□ -0.53
PDLIM5-202ENST00000318007 NDUFA4O00483 81 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 HYPMO75409 117 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 ZP3P21754 424 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 C10orf113Q5VZT2 155 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 IFITM2Q01629 132 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 MIR17HGQ75NE6 70 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 ZNF680Q8NEM1 530 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 ANK2Q01484 3957 aa11.76□□□□□ -0.53
PDLIM5-202ENST00000318007 M6PRP20645 277 aa11.75□□□□□ -0.53
PDLIM5-202ENST00000318007 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-202ENST00000318007 IQCF2Q8IXL9 164 aa11.75□□□□□ -0.53
PDLIM5-202ENST00000318007 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
PDLIM5-202ENST00000318007 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
PDLIM5-202ENST00000318007 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 SERF2P84101 59 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 KLF5Q13887 457 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 GPHB5Q86YW7 130 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 METTL26Q96S19 204 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 ATP6V0BQ99437 205 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 SLC25A39Q9BZJ4 359 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 A0A1W2PPV4 95 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 NPPCP23582 126 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 FHL3Q13643 280 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 LCN15Q6UWW0 184 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 DAZ1Q9NQZ3 744 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-202ENST00000318007 TMEM213A2RRL7 107 aa11.73□□□□□ -0.53
PDLIM5-202ENST00000318007 H3BTX0 84 aa11.73□□□□□ -0.53
PDLIM5-202ENST00000318007 PRB4P10163 310 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-202ENST00000318007 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-202ENST00000318007 PFDN5Q99471 154 aa11.73□□□□□ -0.53
PDLIM5-202ENST00000318007 OR10J4P0C629 311 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 MRPL27Q9P0M9 148 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 OR4F17Q8NGA8 305 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 RAB24Q969Q5 203 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 OR4F4Q96R69 305 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 UBQLN2Q9UHD9 624 aa11.72□□□□□ -0.53
PDLIM5-202ENST00000318007 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 OVOL1O14753 267 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 OR7C2O60412 319 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 IFNA7P01567 189 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 PYYP10082 97 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 SULT1A2P50226 295 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 SHISA2Q6UWI4 295 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 SFT2D1Q8WV19 159 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 UFC1Q9Y3C8 167 aa11.71□□□□□ -0.53
PDLIM5-202ENST00000318007 C2orf70A6NJV1 201 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 ZNF98A6NK75 572 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 MBP02144 154 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 FOLR2P14207 255 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 RHOBP62745 196 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 TMPRSS5Q9H3S3 457 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 FUT9Q9Y231 359 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 H3BRN7 92 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 SAP30O75446 220 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 CBLN1P23435 193 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 MYCNOSP40205 109 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 PLP1P60201 277 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 RNF2Q99496 336 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 SLC25A2Q9BXI2 301 aa11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-202ENST00000318007 IGHV7-4-1A0A0J9YVY3 117 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 BUB3O43684 328 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 ARL14EPLP0DKL9 152 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 CRYBB3P26998 211 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
PDLIM5-202ENST00000318007 SHANK2-AS3Q9BTD1 123 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms