RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 PSG1P11464 419 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 GUK1Q16774 197 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 ZNF600Q6ZNG1 722 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 C11orf44Q8N8P7 122 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 TREM1Q9NP99 234 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 TMEM167BQ9NRX6 74 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 HIGD1AQ9Y241 93 aa11.95□□□□□ -0.5
HNF4A-202ENST00000316673 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 OR2T8A6NH00 312 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 I3L521 148 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 OR2C1O95371 312 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 C8orf88P0DMB2 117 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 ORM2P19652 201 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
HNF4A-202ENST00000316673 LYZP61626 148 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 ZNF491Q8N8L2 437 aa11.94□□□□□ -0.5
HNF4A-202ENST00000316673 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
HNF4A-202ENST00000316673 A0A1B0GV50 99 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 BMPR1BO00238 502 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
HNF4A-202ENST00000316673 CLEC3BP05452 202 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 GPR183P32249 361 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 RNF125Q96EQ8 232 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
HNF4A-202ENST00000316673 M0QZ24 198 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 TGOLN2O43493 480 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 IL4P05112 153 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
HNF4A-202ENST00000316673 TOR2AQ5JU69 321 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 GNB4Q9HAV0 340 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 SEPSECSQ9HD40 501 aaKnown RBP11.92□□□□□ -0.5
HNF4A-202ENST00000316673 VAX2Q9UIW0 290 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 ARL2-SNX15V9GYD0 113 aa11.92□□□□□ -0.5
HNF4A-202ENST00000316673 OR7C2O60412 319 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 CTSGP08311 255 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 BCL2P10415 239 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
HNF4A-202ENST00000316673 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 OR4F17Q8NGA8 305 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 OR4F4Q96R69 305 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 DOK5Q9P104 306 aa11.91□□□□□ -0.5
HNF4A-202ENST00000316673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.9□□□□□ -0.5
HNF4A-202ENST00000316673 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 HSPB1P04792 205 aaKnown RBP11.9□□□□□ -0.5
HNF4A-202ENST00000316673 ARL3P36405 182 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 ZNF506Q5JVG8 444 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 RABAC1Q9UI14 185 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 S4R3C0 116 aa11.9□□□□□ -0.5
HNF4A-202ENST00000316673 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 CD5P06127 495 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 GCHFRP30047 84 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 NKX6-2Q9C056 277 aaPredicted RBP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 ADARB2-AS1A8MUL3 147 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 ZP3P21754 424 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 HAGHQ16775 308 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 SSX7Q7RTT5 188 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 PAXXQ9BUH6 204 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 SLC35B3Q9H1N7 401 aa11.89□□□□□ -0.51
HNF4A-202ENST00000316673 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 PUS1Q9Y606 427 aaKnown RBP eCLIP11.89□□□□□ -0.51
HNF4A-202ENST00000316673 GGCTO75223 188 aaKnown RBP11.88□□□□□ -0.51
HNF4A-202ENST00000316673 CCL20P78556 96 aa11.88□□□□□ -0.51
HNF4A-202ENST00000316673 BPIFA4PQ86YQ2 179 aa11.88□□□□□ -0.51
HNF4A-202ENST00000316673 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
HNF4A-202ENST00000316673 OR51M1Q9H341 326 aa11.88□□□□□ -0.51
HNF4A-202ENST00000316673 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
HNF4A-202ENST00000316673 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 TMEM218A2RU14 115 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 NDUFA4O00483 81 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 PDE6DO43924 150 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 IGHV3-11P01762 117 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 UBE2L3P68036 154 aaKnown RBP11.87□□□□□ -0.51
HNF4A-202ENST00000316673 DEFA5Q01523 94 aa11.87□□□□□ -0.51
HNF4A-202ENST00000316673 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
HNF4A-202ENST00000316673 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms