RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SEPSECSQ9HD40 501 aaKnown RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 DAZ1Q9NQZ3 744 aaKnown RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 SMPXQ9UHP9 88 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 IGHV3OR16-13A0A075B7E8 117 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 IGHV3-49A0A0A0MS15 119 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 BORCS7-ASMTA0A0B4J1R7 106 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 IGHV3-74A0A0B4J1X5 117 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 M0QZ24 198 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 CHEK1O14757 476 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 BUB3O43684 328 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 PF4P02776 101 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 FOLR2P14207 255 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 ORM2P19652 201 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 LYZP61626 148 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 RAB31Q13636 194 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SPATA31B1PQ5VZV4 182 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 FAM90A2PQ658T7 463 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SLC51BQ86UW2 128 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 ST8SIA2Q92186 375 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 DNAJC4Q9NNZ3 241 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SIGLEC8Q9NYZ4 499 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 DOK5Q9P104 306 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 MLXQ9UH92 298 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SELENOKQ9Y6D0 94 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 TRAV5A0A0B4J249 113 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 H3BRN7 92 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
RFX3-201ENST00000302303 HYPMO75409 117 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 EIF3GO75821 320 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFX3-201ENST00000302303 FABP1P07148 127 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 OR5G3P0C626 314 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SEC11BP0C7V7 166 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 NPPCP23582 126 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 RAB2AP61019 212 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SERF2P84101 59 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 FFAR4Q5NUL3 377 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SSX7Q7RTT5 188 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 OR1B1Q8NGR6 318 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 GNPNAT1Q96EK6 184 aaPredicted RBP7.17□□□□□ -1.26
RFX3-201ENST00000302303 FAM167A-AS1Q96KT0 104 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 PBDC1Q9BVG4 233 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SCRT1Q9BWW7 348 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SLC25A39Q9BZJ4 359 aaPredicted RBP7.17□□□□□ -1.26
RFX3-201ENST00000302303 RPRMQ9NS64 109 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 UFC1Q9Y3C8 167 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
RFX3-201ENST00000302303 IGHV3-66A0A0C4DH42 116 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 ZNF98A6NK75 572 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 C17orf112F2Z3M2 114 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 WIPF1O43516 503 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 SCGB2A1O75556 95 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 TPT1P13693 172 aaKnown RBP7.16□□□□□ -1.26
RFX3-201ENST00000302303 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 PRR31Q5SQ13 230 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 PXDC1Q5TGL8 231 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 LEMD1Q68G75 181 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 C16orf54Q6UWD8 224 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 Q6ZRG5 221 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 ZNF709Q8N972 641 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 GATAD1Q8WUU5 269 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 TMED6Q8WW62 240 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 GLMPQ8WWB7 406 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 ZNF503Q96F45 646 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 RNF2Q99496 336 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 SHANK2-AS3Q9BTD1 123 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 RHPN1-AS1Q9BWJ2 59 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 TECRQ9NZ01 308 aaKnown RBP7.16□□□□□ -1.26
RFX3-201ENST00000302303 RABAC1Q9UI14 185 aa7.16□□□□□ -1.26
RFX3-201ENST00000302303 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.27
RFX3-201ENST00000302303 IZUMO1RA6ND01 250 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 SEC14L6B5MCN3 397 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 IGLV1-51P01701 117 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 IGLL1P15814 213 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 M6PRP20645 277 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 FHITP49789 147 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 C10orf113Q5VZT2 155 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 MIR17HGQ75NE6 70 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 LINC00305Q7Z4B0 112 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 METTL26Q96S19 204 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 ELOVL1Q9BW60 279 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 PEMTQ9UBM1 199 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.27
RFX3-201ENST00000302303 COX7A2P2O60397 106 aa7.14□□□□□ -1.27
RFX3-201ENST00000302303 IFITM2Q01629 132 aa7.14□□□□□ -1.27
RFX3-201ENST00000302303 FAM78BQ5VT40 261 aa7.14□□□□□ -1.27
RFX3-201ENST00000302303 MARC2Q969Z3 335 aa7.14□□□□□ -1.27
RFX3-201ENST00000302303 SLC25A2Q9BXI2 301 aa7.14□□□□□ -1.27
RFX3-201ENST00000302303 DNAH3Q8TD57 4116 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 ZNF785A8K8V0 405 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 CD300EQ496F6 205 aaPredicted RBP7.13□□□□□ -1.27
RFX3-201ENST00000302303 TMEM41BQ5BJD5 291 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 FAM74A1Q5RGS3 127 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 C1orf194Q5T5A4 169 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 ALKAL2Q6UX46 152 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 OR10G4Q8NGN3 311 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 OR10G9Q8NGN4 311 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 OR10G7Q8NGN6 311 aa7.13□□□□□ -1.27
RFX3-201ENST00000302303 OR1L4Q8NGR5 311 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms