RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 BBC3Q96PG8 261 aaPredicted RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 TRAV8-1A0A0A6YYK1 113 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 CORTO00230 105 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 GGCTO75223 188 aaKnown RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 SRP14P37108 136 aaKnown RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 GRIFINA4D1Z8 144 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 RAB4BP61018 213 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 PAX2Q02962 417 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 FAM168AQ92567 244 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 MS4A10Q96PG2 267 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 PYGO2Q9BRQ0 406 aa11.5□□□□□ -0.57
SMG8-201ENST00000300917 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
SMG8-201ENST00000300917 PHOX2AO14813 284 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 IER3P46695 156 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 BAGE2Q86Y30 109 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 RNF2Q99496 336 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 NAV2Q8IVL1 2488 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 PEX7O00628 323 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 NDUFA3O95167 84 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 SMIM6P0DI80 62 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
SMG8-201ENST00000300917 CNN1P51911 297 aaKnown RBP11.49□□□□□ -0.57
SMG8-201ENST00000300917 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
SMG8-201ENST00000300917 MAPK1IP1LQ8NDC0 245 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 RNF5Q99942 180 aa11.49□□□□□ -0.57
SMG8-201ENST00000300917 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
SMG8-201ENST00000300917 ANKRD17O75179 2603 aaKnown RBP11.49□□□□□ -0.57
SMG8-201ENST00000300917 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 G3V318 75 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 NDUFB8O95169 186 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 NPBQ8NG41 125 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 FBN2P35556 2912 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
SMG8-201ENST00000300917 HIST1H1BP16401 226 aaKnown RBP11.48□□□□□ -0.57
SMG8-201ENST00000300917 IGHV4-30-2A0A087WSY4 118 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 PDLIM4P50479 330 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 UBE2G1P62253 170 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
SMG8-201ENST00000300917 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
SMG8-201ENST00000300917 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 IGHV7-81A0A0B4J1V7 117 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 COTL1Q14019 142 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 LY6EQ16553 131 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 V9GYV3 84 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 DOPEY2Q9Y3R5 2298 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 CENPVL3A0A0U1RRI6 287 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 C9JCJ5 164 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 OVOL3O00110 214 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 S100A8P05109 93 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 UNQ5815/PRO19632Q6UWF5 114 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 Q8N9W7 124 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 TMEM68Q96MH6 324 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 Q9H3A6 140 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 UBE2E1P51965 193 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 RPEL1Q2QD12 228 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 PYY3Q5JQD4 70 aa11.47□□□□□ -0.57
SMG8-201ENST00000300917 NPFFO15130 113 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 CD99P14209 185 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 GP9P14770 177 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 OR1L6Q8NGR2 347 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 ZNF586Q9NXT0 402 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 CBY1Q9Y3M2 126 aa11.46□□□□□ -0.57
SMG8-201ENST00000300917 COL8A1P27658 744 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 ADMP35318 185 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 USF2Q15853 346 aaPredicted RBP11.46□□□□□ -0.58
SMG8-201ENST00000300917 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 EPDR1Q9UM22 224 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 CCDC168Q8NDH2 2452 aa11.46□□□□□ -0.58
SMG8-201ENST00000300917 ATP6V0E1O15342 81 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 RNF125Q96EQ8 232 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 GNB4Q9HAV0 340 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 FOXL1Q12952 345 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
SMG8-201ENST00000300917 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
SMG8-201ENST00000300917 GOLT1AQ6ZVE7 132 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms