RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 SCGB1C1Q8TD33 95 aa17.06■□□□□ 0.32
LINC01116-201ENST00000295549 ST8SIA2Q92186 375 aa17.06■□□□□ 0.32
LINC01116-201ENST00000295549 IGHV3OR16-13A0A075B7E8 117 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 IGHV3-74A0A0B4J1X5 117 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 TAAR5O14804 337 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 HYPMO75409 117 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 CD5P06127 495 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 BEAN1Q3B7T3 259 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 ZNF709Q8N972 641 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 OR1B1Q8NGR6 318 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 RNF2Q99496 336 aa17.05■□□□□ 0.32
LINC01116-201ENST00000295549 BUB3O43684 328 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 B2MP61769 119 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 Q6ZRG5 221 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 KCNRGQ8N5I3 272 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 GRAMD2BQ96HH9 432 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 ARL6Q9H0F7 186 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 KCNIP2Q9NS61 270 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 SLC39A9Q9NUM3 307 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 PXMP4Q9Y6I8 212 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 TRAV25A0A0B4J276 109 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 A0A0D9SG52 128 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 C17orf112F2Z3M2 114 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 S100A7P31151 101 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 CD300CQ08708 224 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 LAMTOR1Q6IAA8 161 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 LCN12Q6JVE5 192 aa17.04■□□□□ 0.32
LINC01116-201ENST00000295549 DNAH3Q8TD57 4116 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 ELOA3CA0A087WX78 387 aaPredicted RBP17.03■□□□□ 0.32
LINC01116-201ENST00000295549 IGHV3-66A0A0C4DH42 116 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 KRTAP10-11P60412 298 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 S100A7AQ86SG5 101 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 TMEM61Q8N0U2 210 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 HYLS1Q96M11 299 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 DOK5Q9P104 306 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 HIGD1AQ9Y241 93 aa17.03■□□□□ 0.32
LINC01116-201ENST00000295549 CXCL2P19875 107 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 C1orf194Q5T5A4 169 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 FAM90A2PQ658T7 463 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 C16orf54Q6UWD8 224 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 PATE2Q6UY27 113 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 RBPMS2Q6ZRY4 209 aaKnown RBP17.02■□□□□ 0.31
LINC01116-201ENST00000295549 RSG1Q9BU20 258 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 ARV1Q9H2C2 271 aa17.02■□□□□ 0.31
LINC01116-201ENST00000295549 IZUMO1RA6ND01 250 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 TSPAN4O14817 238 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 OR5G3P0C626 314 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 RPL7L1Q6DKI1 246 aaKnown RBP17.01■□□□□ 0.31
LINC01116-201ENST00000295549 GLMPQ8WWB7 406 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 TMEM37Q8WXS4 190 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 DNAJC4Q9NNZ3 241 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 SELENOKQ9Y6D0 94 aa17.01■□□□□ 0.31
LINC01116-201ENST00000295549 BORCS7-ASMTA0A0B4J1R7 106 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 ZNF98A6NK75 572 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 COX7A2P2O60397 106 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 JTBO76095 146 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 TCF24Q7RTU0 167 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 OR1L4Q8NGR5 311 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 SHANK2-AS3Q9BTD1 123 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 SLC25A39Q9BZJ4 359 aaPredicted RBP17■□□□□ 0.31
LINC01116-201ENST00000295549 CYTL1Q9NRR1 136 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 ZNF256Q9Y2P7 627 aaPredicted RBP17■□□□□ 0.31
LINC01116-201ENST00000295549 TIMM9Q9Y5J7 89 aa17■□□□□ 0.31
LINC01116-201ENST00000295549 ZNF785A8K8V0 405 aa16.99■□□□□ 0.31
LINC01116-201ENST00000295549 C10orf113Q5VZT2 155 aa16.99■□□□□ 0.31
LINC01116-201ENST00000295549 PFDN5Q99471 154 aa16.99■□□□□ 0.31
LINC01116-201ENST00000295549 ARPC5LQ9BPX5 153 aa16.99■□□□□ 0.31
LINC01116-201ENST00000295549 HELTA6NFD8 242 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 H3BRN7 92 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 LINC00305Q7Z4B0 112 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 GATAD1Q8WUU5 269 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 UHRF2Q96PU4 802 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 SPAG8Q99932 426 aaPredicted RBP16.98■□□□□ 0.31
LINC01116-201ENST00000295549 RNF24Q9Y225 148 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 SORL1Q92673 2214 aa16.98■□□□□ 0.31
LINC01116-201ENST00000295549 GP9P14770 177 aa16.97■□□□□ 0.31
LINC01116-201ENST00000295549 ZFP69Q49AA0 526 aa16.97■□□□□ 0.31
LINC01116-201ENST00000295549 TMUB2Q71RG4 321 aa16.97■□□□□ 0.31
LINC01116-201ENST00000295549 HSD17B11Q8NBQ5 300 aa16.97■□□□□ 0.31
LINC01116-201ENST00000295549 PSMG3Q9BT73 122 aaPredicted RBP16.97■□□□□ 0.31
LINC01116-201ENST00000295549 ATP6V0CP27449 155 aa16.96■□□□□ 0.31
LINC01116-201ENST00000295549 GUCA2BQ16661 112 aa16.96■□□□□ 0.31
LINC01116-201ENST00000295549 LGALSLQ3ZCW2 172 aaPredicted RBP16.96■□□□□ 0.31
LINC01116-201ENST00000295549 SIGLEC15Q6ZMC9 328 aa16.96■□□□□ 0.31
LINC01116-201ENST00000295549 OR8I2Q8N0Y5 310 aa16.96■□□□□ 0.31
LINC01116-201ENST00000295549 SCRT1Q9BWW7 348 aa16.96■□□□□ 0.31
LINC01116-201ENST00000295549 KANTRA0A1W2PQU2 76 aa16.96■□□□□ 0.3
LINC01116-201ENST00000295549 BCL2L11O43521 198 aa16.96■□□□□ 0.3
LINC01116-201ENST00000295549 RPL11P62913 178 aaKnown RBP16.96■□□□□ 0.3
LINC01116-201ENST00000295549 GCSAMLQ5JQS6 135 aa16.96■□□□□ 0.3
LINC01116-201ENST00000295549 FFAR4Q5NUL3 377 aa16.96■□□□□ 0.3
LINC01116-201ENST00000295549 GNPNAT1Q96EK6 184 aaPredicted RBP16.96■□□□□ 0.3
LINC01116-201ENST00000295549 GPR82Q96P67 336 aa16.96■□□□□ 0.3
LINC01116-201ENST00000295549 PAFAH1B2P68402 229 aa16.95■□□□□ 0.3
LINC01116-201ENST00000295549 LEMD1Q68G75 181 aa16.95■□□□□ 0.3
LINC01116-201ENST00000295549 OR2G3Q8NGZ4 309 aa16.95■□□□□ 0.3
LINC01116-201ENST00000295549 SLC25A22Q9H936 323 aa16.95■□□□□ 0.3
LINC01116-201ENST00000295549 TRAV2A0A0B4J234 112 aa16.94■□□□□ 0.3
LINC01116-201ENST00000295549 SERF2P84101 59 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms