RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 TMEM147Q9BVK8 224 aa14.8□□□□□ -0.04
TIMP4-201ENST00000287814 SLC25A31Q9H0C2 315 aa14.8□□□□□ -0.04
TIMP4-201ENST00000287814 SLC45A2Q9UMX9 530 aa14.8□□□□□ -0.04
TIMP4-201ENST00000287814 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
TIMP4-201ENST00000287814 SELENOTP62341 195 aa14.79□□□□□ -0.04
TIMP4-201ENST00000287814 FAM24BQ8N5W8 94 aa14.79□□□□□ -0.04
TIMP4-201ENST00000287814 OR1B1Q8NGR6 318 aa14.79□□□□□ -0.04
TIMP4-201ENST00000287814 DOK5Q9P104 306 aa14.79□□□□□ -0.04
TIMP4-201ENST00000287814 COL7A1Q02388 2944 aa14.79□□□□□ -0.04
TIMP4-201ENST00000287814 UBE2L5PA0A1B0GUS4 154 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 LINC00869P0C866 280 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 PET100P0DJ07 73 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 LYL1P12980 280 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 OR5C1Q8NGR4 320 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 TUBA4BQ9H853 241 aa14.78□□□□□ -0.04
TIMP4-201ENST00000287814 RBMY1BA6NDE4 496 aaKnown RBP14.77□□□□□ -0.04
TIMP4-201ENST00000287814 RBMY1EA6NEQ0 496 aaKnown RBP14.77□□□□□ -0.04
TIMP4-201ENST00000287814 RBMY1DP0C7P1 496 aaKnown RBP14.77□□□□□ -0.04
TIMP4-201ENST00000287814 PLP1P60201 277 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 PAFAH1B2P68402 229 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 ATP6V1FQ16864 119 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 PATE2Q6UY27 113 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 LINC00322Q6ZN03 302 aaPredicted RBP14.77□□□□□ -0.04
TIMP4-201ENST00000287814 STXBP6Q8NFX7 210 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 SRD5A3Q9H8P0 318 aa14.77□□□□□ -0.04
TIMP4-201ENST00000287814 DNASE2O00115 360 aaPredicted RBP14.77□□□□□ -0.05
TIMP4-201ENST00000287814 BAXQ07812 192 aa14.77□□□□□ -0.05
TIMP4-201ENST00000287814 DCANP1Q8TF63 244 aa14.77□□□□□ -0.05
TIMP4-201ENST00000287814 PPP1R14BQ96C90 147 aa14.77□□□□□ -0.05
TIMP4-201ENST00000287814 HELTA6NFD8 242 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 K7EQG2 157 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 GIPP09681 153 aaPredicted RBP14.76□□□□□ -0.05
TIMP4-201ENST00000287814 RPL12P30050 165 aaKnown RBP14.76□□□□□ -0.05
TIMP4-201ENST00000287814 CAMLGP49069 296 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 CLINT1Q14677 625 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 ZNF124Q15973 351 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 SIGLEC15Q6ZMC9 328 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 ZNF546Q86UE3 836 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 APRG1Q8IVJ8 170 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 GGTLC1Q9BX51 225 aa14.76□□□□□ -0.05
TIMP4-201ENST00000287814 TRAV2A0A0B4J234 112 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 ZNF98A6NK75 572 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 HYPMO75409 117 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 C1orf194Q5T5A4 169 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 LEMD1Q68G75 181 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 THAP6Q8TBB0 222 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 CHAC2Q8WUX2 184 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 UHRF2Q96PU4 802 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 FAM110AQ9BQ89 295 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 ARL6Q9H0F7 186 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 MAP6D1Q9H9H5 199 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 PFDN2Q9UHV9 154 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 HSPB11Q9Y547 144 aa14.75□□□□□ -0.05
TIMP4-201ENST00000287814 NUP62P37198 522 aaPredicted RBP14.74□□□□□ -0.05
TIMP4-201ENST00000287814 AP2S1P53680 142 aaPredicted RBP14.74□□□□□ -0.05
TIMP4-201ENST00000287814 PRR20EP86478 221 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 PRR20CP86479 221 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 PRR20DP86480 221 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 PRR20BP86481 221 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 PRR20AP86496 221 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 MIC13Q5XKP0 118 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 SCRT1Q9BWW7 348 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 SLC25A39Q9BZJ4 359 aaPredicted RBP14.74□□□□□ -0.05
TIMP4-201ENST00000287814 OR5G3P0C626 314 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 FGF7P21781 194 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 OR8I2Q8N0Y5 310 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 SLC25A22Q9H936 323 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 HIGD1AQ9Y241 93 aa14.74□□□□□ -0.05
TIMP4-201ENST00000287814 H3BRN7 92 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 RAB31Q13636 194 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 HAGHQ16775 308 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 TMEM37Q8WXS4 190 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 C17orf77Q96MU5 243 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 SHANK2-AS3Q9BTD1 123 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 ARV1Q9H2C2 271 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 SLC25A32Q9H2D1 315 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
TIMP4-201ENST00000287814 DEFB131AP59861 70 aa14.72□□□□□ -0.05
TIMP4-201ENST00000287814 RAP2BP61225 183 aa14.72□□□□□ -0.05
TIMP4-201ENST00000287814 OPCMLQ14982 345 aa14.72□□□□□ -0.05
TIMP4-201ENST00000287814 ASB13Q8WXK3 278 aa14.72□□□□□ -0.05
TIMP4-201ENST00000287814 SMIM3Q9BZL3 60 aa14.72□□□□□ -0.05
TIMP4-201ENST00000287814 G3V3Q6 166 aa14.71□□□□□ -0.05
TIMP4-201ENST00000287814 ZNF688P0C7X2 276 aa14.71□□□□□ -0.05
TIMP4-201ENST00000287814 RPL29P47914 159 aaKnown RBP14.71□□□□□ -0.05
TIMP4-201ENST00000287814 NPCDR1Q9BY65 106 aa14.71□□□□□ -0.05
TIMP4-201ENST00000287814 WFDC1Q9HC57 220 aa14.71□□□□□ -0.05
TIMP4-201ENST00000287814 FBXL17Q9UF56 701 aa14.71□□□□□ -0.05
TIMP4-201ENST00000287814 HUWE1Q7Z6Z7 4374 aaKnown RBP14.71□□□□□ -0.05
TIMP4-201ENST00000287814 PXDC1Q5TGL8 231 aa14.71□□□□□ -0.06
TIMP4-201ENST00000287814 WDR61Q9GZS3 305 aaKnown RBP14.71□□□□□ -0.06
TIMP4-201ENST00000287814 MPDU1O75352 247 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 NHLRC4P0CG21 123 aaPredicted RBP14.7□□□□□ -0.06
TIMP4-201ENST00000287814 CMC4P56277 68 aaPredicted RBP14.7□□□□□ -0.06
TIMP4-201ENST00000287814 FGL1Q08830 312 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 MORN5Q5VZ52 161 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 OR2T35Q8NGX2 323 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 ATP5SQ99766 215 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 SLC39A9Q9NUM3 307 aa14.7□□□□□ -0.06
TIMP4-201ENST00000287814 PXMP4Q9Y6I8 212 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms