RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 KCNIP2Q9NS61 270 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 HYPMO75409 117 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 OR5G3P0C626 314 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 ADAMTSL5Q6ZMM2 481 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 OR9G4Q8NGQ1 327 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 DAZ1Q9NQZ3 744 aaKnown RBP16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 RPRMQ9NS64 109 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 ANK2Q01484 3957 aa16.58■□□□□ 0.25
PDLIM3-203ENST00000284771 IGHV3OR16-13A0A075B7E8 117 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 IGHV3-49A0A0A0MS15 119 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 IGHV3-74A0A0B4J1X5 117 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 K7EMT4 169 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 PF4P02776 101 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 CRYBB3P26998 211 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 ALKAL2Q6UX46 152 aa16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 RPP25LQ8N5L8 163 aaKnown RBP16.58■□□□□ 0.24
PDLIM3-203ENST00000284771 EIF3GO75821 320 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 M6PRP20645 277 aa16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 PXDC1Q5TGL8 231 aa16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 RABAC1Q9UI14 185 aa16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 UFC1Q9Y3C8 167 aa16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 U3KQE9 123 aa16.57■□□□□ 0.24
PDLIM3-203ENST00000284771 COX7A2P2O60397 106 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 NPPCP23582 126 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 FHITP49789 147 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 KRTAP21-3Q3LHN1 58 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 FAM74A1Q5RGS3 127 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 C10orf113Q5VZT2 155 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 SPATA31B1PQ5VZV4 182 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 LINC00305Q7Z4B0 112 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 GATAD1Q8WUU5 269 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 SLC25A39Q9BZJ4 359 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 HIGD1AQ9Y241 93 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 ELOA3CA0A087WX78 387 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 C2orf70A6NJV1 201 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 OVOL1O14753 267 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 LEMD1Q68G75 181 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 OR10G4Q8NGN3 311 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 OR10G9Q8NGN4 311 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 OR10G7Q8NGN6 311 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 METTL26Q96S19 204 aa16.56■□□□□ 0.24
PDLIM3-203ENST00000284771 NOTCH3Q9UM47 2321 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 IGHV3-66A0A0C4DH42 116 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 BUB3O43684 328 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 CSN3P07498 182 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 CBLN1P23435 193 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 ACOT6Q3I5F7 207 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 FAM78BQ5VT40 261 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 TEX261Q6UWH6 196 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 OR1L4Q8NGR5 311 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 PHYHIPLQ96FC7 376 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 PFDN5Q99471 154 aa16.55■□□□□ 0.24
PDLIM3-203ENST00000284771 TRAV5A0A0B4J249 113 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 IGHV7-4-1A0A0J9YVY3 117 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 C8orf88P0DMB2 117 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 TMEM41BQ5BJD5 291 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 SSX7Q7RTT5 188 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 SHANK2-AS3Q9BTD1 123 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 SCRT1Q9BWW7 348 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 SMPXQ9UHP9 88 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 SELENOKQ9Y6D0 94 aa16.54■□□□□ 0.24
PDLIM3-203ENST00000284771 ZNF98A6NK75 572 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 H3BRN7 92 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 M0QZ24 198 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 FOLR2P14207 255 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 IFITM2Q01629 132 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 ZNF726P1Q15940 193 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 AKR1C8PQ5T2L2 129 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 EIF5AL1Q6IS14 154 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 MBP02144 154 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 MIR17HGQ75NE6 70 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 RHPN1-AS1Q9BWJ2 59 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 PEMTQ9UBM1 199 aa16.53■□□□□ 0.24
PDLIM3-203ENST00000284771 CHEK1O14757 476 aa16.52■□□□□ 0.23
PDLIM3-203ENST00000284771 SULT1A2P50226 295 aa16.52■□□□□ 0.23
PDLIM3-203ENST00000284771 FAM122CQ6P4D5 195 aa16.52■□□□□ 0.23
PDLIM3-203ENST00000284771 ZNF680Q8NEM1 530 aa16.52■□□□□ 0.23
PDLIM3-203ENST00000284771 FUT9Q9Y231 359 aa16.52■□□□□ 0.23
PDLIM3-203ENST00000284771 PKD1L1Q8TDX9 2849 aa16.51■□□□□ 0.23
PDLIM3-203ENST00000284771 UMAD1C9J7I0 102 aa16.51■□□□□ 0.23
PDLIM3-203ENST00000284771 WFDC9Q8NEX5 89 aa16.51■□□□□ 0.23
PDLIM3-203ENST00000284771 ELOVL1Q9BW60 279 aa16.51■□□□□ 0.23
PDLIM3-203ENST00000284771 SLC25A22Q9H936 323 aa16.51■□□□□ 0.23
PDLIM3-203ENST00000284771 SEC14L6B5MCN3 397 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 HMGB3O15347 200 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 RAB24Q969Q5 203 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 FAM167A-AS1Q96KT0 104 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 RNF2Q99496 336 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 MLXQ9UH92 298 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 RHOBP62745 196 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 C16orf54Q6UWD8 224 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 SLC25A2Q9BXI2 301 aa16.5■□□□□ 0.23
PDLIM3-203ENST00000284771 CDC34P49427 236 aaPredicted RBP16.49■□□□□ 0.23
PDLIM3-203ENST00000284771 ZNF503Q96F45 646 aa16.49■□□□□ 0.23
PDLIM3-203ENST00000284771 MRPL32Q9BYC8 188 aaKnown RBP16.49■□□□□ 0.23
PDLIM3-203ENST00000284771 A0A1W2PPV4 95 aa16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 FAM213BQ8TBF2 198 aa16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 GLMPQ8WWB7 406 aa16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 MARC2Q969Z3 335 aa16.48■□□□□ 0.23
PDLIM3-203ENST00000284771 C17orf77Q96MU5 243 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms