RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 GOLT1BQ9Y3E0 138 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 TRBV12-3P01733 135 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
SSRP1-201ENST00000278412 RHOGP84095 191 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ICAM4Q14773 271 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 TMEM116Q8NCL8 245 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ZNF414Q96IQ9 312 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 TCRBV4S1A1TA0A5B7 111 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 M0R036 132 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 PPP1R2P9O14990 202 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 DLEU1O43261 78 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 PSG1P11464 419 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 OR1B1Q8NGR6 318 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 MBD3L1Q8WWY6 194 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 PBDC1Q9BVG4 233 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 TRAV41A0A0B4J266 112 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 MPDU1O75352 247 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 IGHV3-11P01762 117 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 PYYP10082 97 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
SSRP1-201ENST00000278412 RPS10P46783 165 aaKnown RBP9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
SSRP1-201ENST00000278412 Q6YL49 198 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 THAP8Q8NA92 274 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 OR5B12Q96R08 314 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 ESM1Q9NQ30 184 aa9.13□□□□□ -0.95
SSRP1-201ENST00000278412 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 OR5G3P0C626 314 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 ADMP35318 185 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 ATRQ13535 2644 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 CTXND1A0A1B0GTU2 59 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 PPP5D1E7EU14 171 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 GPR183P32249 361 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 SLC35E3Q7Z769 313 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 OR51G1Q8NGK1 321 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
SSRP1-201ENST00000278412 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
SSRP1-201ENST00000278412 VWFP04275 2813 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 A0A1W2PPV4 95 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 PAGE4O60829 102 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 ATP5G3P48201 142 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 LYZP61626 148 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 Q56UQ5 140 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
SSRP1-201ENST00000278412 CYB561D1Q8N8Q1 229 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 C20orf24Q9BUV8 137 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 IGHV3OR16-13A0A075B7E8 117 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 IGHV3-74A0A0B4J1X5 117 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
SSRP1-201ENST00000278412 ZNF664Q8N3J9 261 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 COMMD1Q8N668 190 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 FAM110DQ8TAY7 271 aaPredicted RBP9.11□□□□□ -0.95
SSRP1-201ENST00000278412 TMEM208Q9BTX3 173 aa9.11□□□□□ -0.95
SSRP1-201ENST00000278412 SORL1Q92673 2214 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 FNDC10F2Z333 226 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 SCAF4O95104 1147 aaKnown RBP9.1□□□□□ -0.95
SSRP1-201ENST00000278412 OR2C1O95371 312 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 IGHG2P01859 326 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 C21orf62Q9NYP8 219 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
SSRP1-201ENST00000278412 IGHV3-49A0A0A0MS15 119 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 CYB5BO43169 146 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 CLEC3BP05452 202 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 ATP5IP56385 69 aaPredicted RBP9.1□□□□□ -0.95
SSRP1-201ENST00000278412 RAB31Q13636 194 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 SVIPQ8NHG7 77 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 SLC25A2Q9BXI2 301 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 VPREB3Q9UKI3 123 aa9.1□□□□□ -0.95
SSRP1-201ENST00000278412 LOC102723971A0A1B0GUV8 181 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 ZNF207O43670 478 aaKnown RBP9.09□□□□□ -0.95
SSRP1-201ENST00000278412 GNG7O60262 68 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 LY6G6DO95868 133 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 CTSGP08311 255 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 FABP4P15090 132 aa9.09□□□□□ -0.95
SSRP1-201ENST00000278412 PPIFP30405 207 aaKnown RBP9.09□□□□□ -0.95
SSRP1-201ENST00000278412 SRP14P37108 136 aaKnown RBP9.09□□□□□ -0.95
SSRP1-201ENST00000278412 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
SSRP1-201ENST00000278412 PACRGQ96M98 296 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms