RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 EPDR1Q9UM22 224 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-201ENST00000277198 IGHV1-8P0DP01 117 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 PYYP10082 97 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 CT83Q5H943 113 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 MRPL54Q6P161 138 aaKnown RBP10.34□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-201ENST00000277198 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 FBXL7Q9UJT9 491 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 TNCP24821 2201 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 DIRC3C9JPN6 131 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 SLC25A17O43808 307 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 SPINK4O60575 86 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 OR2J3O76001 311 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 CD33P20138 364 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 PRRX1P54821 245 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 UBE2G1P62253 170 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 SSBP2P81877 361 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-201ENST00000277198 KLF5Q13887 457 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-201ENST00000277198 GPR82Q96P67 336 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 TMEM133Q9H2Q1 129 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 C7orf69Q9H7B7 122 aa10.33□□□□□ -0.76
C9orf3-201ENST00000277198 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-201ENST00000277198 SLC35B1P78383 322 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 DIAPH2-AS1Q14236 149 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 MRGPRG-AS1Q2M3A8 158 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 C10orf55Q5SWW7 151 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 FAM162BQ5T6X4 162 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 LYPD2Q6UXB3 125 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 Q8N976 141 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 NUP35Q8NFH5 326 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 MTORP42345 2549 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 ACANP16112 2415 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 CRYGBP07316 175 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 MFAP2P55001 183 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 KRTDAPP60985 99 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 FAM168AQ92567 244 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 TMEM68Q96MH6 324 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 UBTD1Q9HAC8 227 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
C9orf3-201ENST00000277198 HYPMO75409 117 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 NBEAP1P0C6P0 100 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 CTRLP40313 264 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 RPL27AP46776 148 aaKnown RBP10.31□□□□□ -0.76
C9orf3-201ENST00000277198 SLAQ13239 276 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 C5orf17Q8NAS9 161 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 RCHY1Q96PM5 261 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 RNF5Q99942 180 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 DYNLRB1Q9NP97 96 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
C9orf3-201ENST00000277198 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
C9orf3-201ENST00000277198 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 C22orf46C9J442 243 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 TOMM40O96008 361 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 RBP4P02753 201 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 RPLP1P05386 114 aaKnown RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 NIT1Q86X76 327 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 BORCS7Q96B45 105 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 SRSF8Q9BRL6 282 aaKnown RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 FAM103A1Q9BTL3 118 aaKnown RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 PRSS22Q9GZN4 317 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 A0A1B0GXF2 115 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 IGLV1-47P01700 117 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 SLC25A5P05141 298 aaKnown RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 ORM2P19652 201 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 KLHDC1Q8N7A1 406 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 OR1B1Q8NGR6 318 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 SSBP3Q9BWW4 388 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-201ENST00000277198 SIGLEC9Q9Y336 463 aa10.3□□□□□ -0.76
C9orf3-201ENST00000277198 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 IGHV1-69-2A0A0G2JMI3 117 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 PGPA6NDG6 321 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 A8MWL6 223 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 SHISA9B4DS77 424 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 FOSL1P15407 271 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 PMCHP20382 165 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 TPSG1Q9NRR2 321 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 TMEM14CQ9P0S9 112 aa10.29□□□□□ -0.76
C9orf3-201ENST00000277198 F11RQ9Y624 299 aaKnown RBP10.29□□□□□ -0.76
C9orf3-201ENST00000277198 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
C9orf3-201ENST00000277198 B9A039 149 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms