RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SPAARA0A1B0GVQ0 90 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 GP9P14770 177 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 C5orf17Q8NAS9 161 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 CHEK1O14757 476 aa21.98■■□□□ 1.11
CBX4-201ENST00000269397 NUDT3O95989 172 aa21.98■■□□□ 1.11
CBX4-201ENST00000269397 OR4A5Q8NH83 315 aa21.98■■□□□ 1.11
CBX4-201ENST00000269397 MEF2CQ06413 473 aaPredicted RBP21.98■■□□□ 1.11
CBX4-201ENST00000269397 RBPMS2Q6ZRY4 209 aaKnown RBP21.98■■□□□ 1.11
CBX4-201ENST00000269397 OR4C5Q8NGB2 326 aa21.98■■□□□ 1.11
CBX4-201ENST00000269397 CEACAM8P31997 349 aaPredicted RBP21.97■■□□□ 1.11
CBX4-201ENST00000269397 VMA21Q3ZAQ7 101 aa21.97■■□□□ 1.11
CBX4-201ENST00000269397 FMC1Q96HJ9 113 aa21.97■■□□□ 1.11
CBX4-201ENST00000269397 CRXO43186 299 aaPredicted RBP21.97■■□□□ 1.11
CBX4-201ENST00000269397 EXOC3-AS1Q8N2X6 119 aa21.97■■□□□ 1.11
CBX4-201ENST00000269397 COL8A1P27658 744 aa21.96■■□□□ 1.11
CBX4-201ENST00000269397 TMEM186Q96B77 213 aa21.96■■□□□ 1.11
CBX4-201ENST00000269397 M0R296 226 aa21.96■■□□□ 1.11
CBX4-201ENST00000269397 TNFRSF1AP19438 455 aa21.96■■□□□ 1.11
CBX4-201ENST00000269397 PRNTQ86SH4 94 aa21.96■■□□□ 1.11
CBX4-201ENST00000269397 LOC102724200A0A096LPH7 203 aaPredicted RBP21.95■■□□□ 1.1
CBX4-201ENST00000269397 IGHV2-70DA0A0C4DH43 119 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 CHCHD1Q96BP2 118 aaKnown RBP21.95■■□□□ 1.1
CBX4-201ENST00000269397 ST20Q9HBF5 79 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 ATMQ13315 3056 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 GVINP1Q7Z2Y8 2422 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 WFDC8Q8IUA0 241 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 ZADH2Q8N4Q0 377 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 DEFB124Q8NES8 71 aa21.95■■□□□ 1.1
CBX4-201ENST00000269397 LYZP61626 148 aa21.94■■□□□ 1.1
CBX4-201ENST00000269397 C17orf100A8MU93 164 aa21.94■■□□□ 1.1
CBX4-201ENST00000269397 CRYGCP07315 174 aa21.94■■□□□ 1.1
CBX4-201ENST00000269397 C1orf185Q5T7R7 199 aa21.94■■□□□ 1.1
CBX4-201ENST00000269397 GOLT1AQ6ZVE7 132 aa21.94■■□□□ 1.1
CBX4-201ENST00000269397 PPIAL4EA0A075B759 164 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 PPIAL4DF5H284 164 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 PPIAL4FP0DN26 164 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 C22orf15Q8WYQ4 148 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 SMIM12Q96EX1 92 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 TRGV9Q99603 122 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 TMUB1Q9BVT8 246 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 MUC21A0A0G2JKD1 596 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 MUC21A0A140T8X8 626 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 ADIPOQQ15848 244 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 MUC21Q5SSG8 566 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 CTSZQ9UBR2 303 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 FAM162BQ5T6X4 162 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 ETFRF1Q6IPR1 90 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 SLC25A34Q6PIV7 304 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 ZNF492Q9P255 531 aa21.93■■□□□ 1.1
CBX4-201ENST00000269397 MALRD1Q5VYJ5 2156 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 NDUFB3O43676 98 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 RNF151Q2KHN1 245 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 C3orf36Q3SXR2 165 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 CT83Q5H943 113 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 CSMD1Q96PZ7 3565 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 CBY3A6NI87 242 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 Q86TA4 180 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 TMEM191AQ9H0A3 160 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 RNF24Q9Y225 148 aa21.92■■□□□ 1.1
CBX4-201ENST00000269397 RPL27AP46776 148 aaKnown RBP21.91■■□□□ 1.1
CBX4-201ENST00000269397 C8orf46Q8TAG6 207 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 POLEQ07864 2286 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 OR2T8A6NH00 312 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 TAX1BP3O14907 124 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 LRRC10Q5BKY1 277 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 BVES-AS1Q5T3Y7 98 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 TMEM116Q8NCL8 245 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 MAP1LC3CQ9BXW4 147 aa21.91■■□□□ 1.1
CBX4-201ENST00000269397 HSBP1L1C9JCN9 74 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 SOX21Q9Y651 276 aaPredicted RBP21.9■■□□□ 1.1
CBX4-201ENST00000269397 TMEM178BH3BS89 294 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 SNAI2O43623 268 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 PSG1P11464 419 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 HTR1DP28221 377 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 FOXE3Q13461 319 aa21.9■■□□□ 1.1
CBX4-201ENST00000269397 A0A087X0K7 114 aa21.89■■□□□ 1.1
CBX4-201ENST00000269397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.89■■□□□ 1.1
CBX4-201ENST00000269397 FTH1P19P0C7X4 201 aa21.89■■□□□ 1.1
CBX4-201ENST00000269397 NDFIP1Q9BT67 221 aa21.89■■□□□ 1.1
CBX4-201ENST00000269397 HIGD1AQ9Y241 93 aa21.89■■□□□ 1.1
CBX4-201ENST00000269397 K7EP13 123 aa21.89■■□□□ 1.09
CBX4-201ENST00000269397 LIPFP07098 398 aa21.89■■□□□ 1.09
CBX4-201ENST00000269397 IGLV2-11P01706 119 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 LOXP28300 417 aaPredicted RBP21.88■■□□□ 1.09
CBX4-201ENST00000269397 TMEM108Q6UXF1 575 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 TPPP3Q9BW30 176 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 GFRA4Q9GZZ7 299 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 C1RLQ9NZP8 487 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 K7EM74 188 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 APOHP02749 345 aaPredicted RBP21.88■■□□□ 1.09
CBX4-201ENST00000269397 ARMS2P0C7Q2 107 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 C17orf77Q96MU5 243 aa21.88■■□□□ 1.09
CBX4-201ENST00000269397 SRSF12Q8WXF0 261 aaKnown RBP21.87■■□□□ 1.09
CBX4-201ENST00000269397 SCRT2Q9NQ03 307 aa21.87■■□□□ 1.09
CBX4-201ENST00000269397 ZGRF1Q86YA3 2104 aa21.87■■□□□ 1.09
CBX4-201ENST00000269397 PIEZO2Q9H5I5 2752 aa21.86■■□□□ 1.09
CBX4-201ENST00000269397 ZNF785A8K8V0 405 aa21.86■■□□□ 1.09
CBX4-201ENST00000269397 MC5RP33032 325 aa21.86■■□□□ 1.09
CBX4-201ENST00000269397 BSPH1Q075Z2 132 aa21.86■■□□□ 1.09
CBX4-201ENST00000269397 LINC00311Q8N616 119 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms