RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 VKORC1Q9BQB6 163 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
CASC3-201ENST00000264645 TCRAP04437 139 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 EMP1P54849 157 aa12.36□□□□□ -0.43
CASC3-201ENST00000264645 C17orf82Q86X59 251 aaPredicted RBP12.36□□□□□ -0.43
CASC3-201ENST00000264645 DPM2O94777 84 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 IFI27P40305 119 aaPredicted RBP12.35□□□□□ -0.43
CASC3-201ENST00000264645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 COLCA1Q6ZS62 124 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 C21orf140B9A014 251 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 WNT2P09544 360 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 LGALS7P47929 136 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 C11orf52Q96A22 123 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 RAXQ9Y2V3 346 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 H3BRM9 83 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 ZNF256Q9Y2P7 627 aaPredicted RBP12.35□□□□□ -0.43
CASC3-201ENST00000264645 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 CEACAM3P40198 252 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 FBXL15Q9H469 300 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
CASC3-201ENST00000264645 TRAV8-2A0A0B4J237 113 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 SMIM27A0A1W2PRY6 76 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 PRR14LQ5THK1 2151 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 IGKCP01834 107 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 ZC2HC1BQ5TFG8 222 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 IGKV3D-15A0A087WSY6 115 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 ARMS2P0C7Q2 107 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 AZU1P20160 251 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 ATP1A1-AS1Q5TC04 95 aa12.34□□□□□ -0.43
CASC3-201ENST00000264645 COX8AP10176 69 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 TDHQ8IZJ6 230 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 CD177Q8N6Q3 437 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 VDAC2P45880 294 aaPredicted RBP12.33□□□□□ -0.44
CASC3-201ENST00000264645 PRB3Q04118 309 aaPredicted RBP12.33□□□□□ -0.44
CASC3-201ENST00000264645 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 SCGB3A1Q96QR1 104 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 K7EP34 96 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
CASC3-201ENST00000264645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
CASC3-201ENST00000264645 RBX1P62877 108 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 RBPJQ06330 500 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 ECSCRQ19T08 205 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 LINC00173Q6ZV60 143 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
CASC3-201ENST00000264645 PMS2P5A8MQ11 134 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 IGKV1-16P04430 117 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 MFAP4P55083 255 aa12.32□□□□□ -0.44
CASC3-201ENST00000264645 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 B3GALT5-AS1P59052 145 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 MEF2CQ06413 473 aaPredicted RBP12.31□□□□□ -0.44
CASC3-201ENST00000264645 LYZL1Q6UWQ5 148 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 COX6CP09669 75 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 SPINK8P0C7L1 97 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 M0R381 172 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 DLX6P56179 175 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 PHLDA3Q9Y5J5 127 aa12.31□□□□□ -0.44
CASC3-201ENST00000264645 ZNF106Q9H2Y7 1883 aaKnown RBP12.31□□□□□ -0.44
CASC3-201ENST00000264645 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 PMS2CLQ68D20 193 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 CHAC1Q9BUX1 264 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 FRMPD3Q5JV73 1810 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 IGHV3-23P01764 117 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 LGALS3P17931 250 aaKnown RBP12.3□□□□□ -0.44
CASC3-201ENST00000264645 CFHR2P36980 270 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 NDUFB8O95169 186 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
CASC3-201ENST00000264645 JMJD8Q96S16 334 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 PRDM6Q9NQX0 595 aa12.3□□□□□ -0.44
CASC3-201ENST00000264645 GLRXP35754 106 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 GEMIN7Q9H840 131 aaKnown RBP12.29□□□□□ -0.44
CASC3-201ENST00000264645 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
CASC3-201ENST00000264645 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 KIF26AQ9ULI4 1882 aaPredicted RBP12.29□□□□□ -0.44
CASC3-201ENST00000264645 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 RAB9AP51151 201 aa12.29□□□□□ -0.44
CASC3-201ENST00000264645 HTN1P15515 57 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
CASC3-201ENST00000264645 ZNF503-AS2A6NEH8 195 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 C8orf46Q8TAG6 207 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
CASC3-201ENST00000264645 WDR86Q86TI4 376 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms