RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
NID1-201ENST00000264187 TIMM21Q9BVV7 248 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 CADP27708 2225 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 KNCNA6PVL3 124 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 LILRA1O75019 489 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 GVINP1Q7Z2Y8 2422 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 H3BUX3 64 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 ZNF672Q499Z4 452 aaPredicted RBP12.4□□□□□ -0.42
NID1-201ENST00000264187 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 VCYO14598 125 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 C3orf79P0CE67 100 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 PAQR4Q8N4S7 273 aaPredicted RBP12.39□□□□□ -0.43
NID1-201ENST00000264187 TMEM200BQ69YZ2 307 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 ADAMTSL5Q6ZMM2 481 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
NID1-201ENST00000264187 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 DLEU1O43261 78 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 TMEM126AQ9H061 195 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 MYMXA0A1B0GTQ4 84 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 LINC00205P59089 165 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 LINC01551Q86U37 167 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 LINC00477Q96M19 166 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 CITED1Q99966 193 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 IGHV1-3A0A0C4DH29 117 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 STPG4Q8N801 248 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
NID1-201ENST00000264187 PFN2P35080 140 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 POLEQ07864 2286 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 COLCA2A8K830 154 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 FGF16O43320 207 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 IGHV3-16A0A0C4DH30 117 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 A0A1B0GWJ7 208 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
NID1-201ENST00000264187 SS18Q15532 418 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 RPRMLQ8N4K4 120 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 DOCK5Q9H7D0 1870 aa12.37□□□□□ -0.43
NID1-201ENST00000264187 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 NDUFS6O75380 124 aaKnown RBP12.36□□□□□ -0.43
NID1-201ENST00000264187 IGHV1-8P0DP01 117 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 MPZP25189 248 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 C1orf194Q5T5A4 169 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 MSRB2Q9Y3D2 182 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 TRAV25A0A0B4J276 109 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 PRB1P04280 392 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 GLRX5Q86SX6 157 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 SYS1-DBNDD2H3BUS1 97 aa12.36□□□□□ -0.43
NID1-201ENST00000264187 MRPL14Q6P1L8 145 aaKnown RBP12.36□□□□□ -0.43
NID1-201ENST00000264187 LY75O60449 1722 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 MYO16Q9Y6X6 1858 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 HEATR1Q9H583 2144 aaKnown RBP12.35□□□□□ -0.43
NID1-201ENST00000264187 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 RPP25LQ8N5L8 163 aaKnown RBP12.35□□□□□ -0.43
NID1-201ENST00000264187 ARFGEF3Q5TH69 2177 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 PSPNO60542 156 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 LRP5O75197 1615 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 GAGE12BA1L429 117 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 RSPO3Q9BXY4 272 aaPredicted RBP12.35□□□□□ -0.43
NID1-201ENST00000264187 DKK1O94907 266 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 TCF15Q12870 199 aa12.35□□□□□ -0.43
NID1-201ENST00000264187 MLANAQ16655 118 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 GFI1Q99684 422 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 NEUROG3Q9Y4Z2 214 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 LY6HO94772 140 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 HAMPP81172 84 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 ABCA4P78363 2273 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 CD5P06127 495 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 PMVKQ15126 192 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 NXPH4O95158 308 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 LIME1Q9H400 295 aa12.34□□□□□ -0.43
NID1-201ENST00000264187 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 GAGE1Q13065 139 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 GAGE4Q13068 117 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 GAGE5Q13069 117 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 CD177Q8N6Q3 437 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 PLSCR4Q9NRQ2 329 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 MORN5Q5VZ52 161 aa12.33□□□□□ -0.44
NID1-201ENST00000264187 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
NID1-201ENST00000264187 NTF4P34130 210 aa12.32□□□□□ -0.44
NID1-201ENST00000264187 C9orf139Q6ZV77 190 aa12.32□□□□□ -0.44
NID1-201ENST00000264187 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
NID1-201ENST00000264187 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms