RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FKBP2P26885 142 aaKnown RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 FOXA3P55318 350 aaPredicted RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF90Q03938 601 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ATP5G2Q06055 141 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 Q0VG73 95 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 RBMY1FQ15415 496 aaKnown RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 MSMO1Q15800 293 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 UBE2SQ16763 222 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 AADACL3Q5VUY0 350 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF880Q6PDB4 577 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 PRR15Q8IV56 129 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ATOH7Q8N100 152 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 C10orf126Q8N4M7 172 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 LINC00471Q8N535 108 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 OR4X2Q8NGF9 303 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 OR10AC1Q8NH08 325 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 OR52P1PQ8NH57 321 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 KLK6Q92876 244 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 RAB37Q96AX2 223 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 BORCS8Q96FH0 119 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 IMUPQ9GZP8 106 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 OR5V1Q9UGF6 321 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 CACFD1Q9UGQ2 172 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 PXMP4Q9Y6I8 212 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ZSWIM8A7E2V4 1837 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 MAP2P11137 1827 aaKnown RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ECM29Q5VYK3 1845 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 KIF13BQ9NQT8 1826 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 MYH7BA7E2Y1 1941 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 PTPRFP10586 1907 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 SBF1O95248 1867 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF638Q14966 1978 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 CUX1P39880 1505 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 IGHV5-51A0A0C4DH38 117 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 A0A1B0GVX0 72 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 IZUMO1RA6ND01 250 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 GEMIN2O14893 280 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 NAPSAO96009 420 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 MT-ND6P03923 174 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 TRGC1P0CF51 173 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 SCGB1C2P0DMR2 95 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 PSMB3P49720 205 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 PPP1CAP62136 330 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 FKBP1AP62942 108 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 SEC11AP67812 179 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 HES3Q5TGS1 186 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF660Q6AZW8 331 aaPredicted RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 Q6ZR03 302 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 LINC00596Q86U02 117 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 RPS19BP1Q86WX3 136 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 C3orf22Q8N5N4 141 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 OR4A5Q8NH83 315 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 SGMS2Q8NHU3 365 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 SCGB1C1Q8TD33 95 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 RPS4Y2Q8TD47 263 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 C2orf15Q8WU43 125 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 COPS9Q8WXC6 57 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 FXYD5Q96DB9 178 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 MS4A6EQ96DS6 147 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 LINC00526Q96FQ7 95 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 IGF2BP2-AS1Q96M15 143 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 OR2A5Q96R48 311 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 AICDAQ9GZX7 198 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 NAA60Q9H7X0 242 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 MARCOQ9UEW3 520 aaPredicted RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 RABAC1Q9UI14 185 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 AK3Q9UIJ7 227 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 PCTPQ9UKL6 214 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 AMMECR1Q9Y4X0 333 aaPredicted RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 CHCHD2Q9Y6H1 151 aaPredicted RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 IQSEC2Q5JU85 1478 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 ADGBQ8N7X0 1667 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 ANKARQ7Z5J8 1434 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 HMGXB3Q12766 1538 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 URB2Q14146 1524 aaKnown RBP2.63□□□□□ -1.99
CCDC54-201ENST00000261058 KNDC1Q76NI1 1749 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 ATG2AQ2TAZ0 1938 aa2.63□□□□□ -1.99
CCDC54-201ENST00000261058 CDK5RAP2Q96SN8 1893 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 PLXNC1O60486 1568 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 NRKQ7Z2Y5 1582 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 HECW2Q9P2P5 1572 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 IGKV2D-24A0A075B6R9 120 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TRAV27A0A087WT01 109 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 FAM236AA0A1B0GUQ0 79 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 FAM236BA0A1B0GV22 79 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TMEM235A6NFC5 223 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 C9JQL5 133 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 INS-IGF2F8WCM5 200 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 H3BRM9 83 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 LGALS9O00182 355 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 HYPMO75409 117 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 UBL3O95164 117 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 IGLV2-8P01709 118 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 GYPAP02724 150 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 MT-ATP8P03928 68 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ASIPP42127 132 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 CA7P43166 264 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 HINT1P49773 126 aaPredicted RBP2.62□□□□□ -1.99
CCDC54-201ENST00000261058 POLR2JP52435 117 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms