RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ATOH7Q8N100 152 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
ZC3H4-201ENST00000253048 A0A1B0GTI1 187 aa11.71□□□□□ -0.53
ZC3H4-201ENST00000253048 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.53
ZC3H4-201ENST00000253048 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.53
ZC3H4-201ENST00000253048 PYYP10082 97 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 PIKFYVEQ9Y2I7 2098 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 TMEM256Q8N2U0 113 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 NKAPP1Q8N9T2 125 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 PKIGQ9Y2B9 76 aa11.71□□□□□ -0.54
ZC3H4-201ENST00000253048 CABIN1Q9Y6J0 2220 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 ZNF138P52744 262 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 SNHG12Q9BXW3 62 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 ATP6V0E1O15342 81 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 RASL10AQ92737 203 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 TPRP12270 2363 aaKnown RBP11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
ZC3H4-201ENST00000253048 PAX9P55771 341 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 DMRTC2Q8IXT2 367 aaPredicted RBP11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 ABCA7Q8IZY2 2146 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 NDUFS5O43920 106 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 ANAPC13Q9BS18 74 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 SPTBP11277 2137 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
ZC3H4-201ENST00000253048 EVI2AP22794 236 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 SVILO95425 2214 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 TRAF4Q9BUZ4 470 aaPredicted RBP11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 MYOFQ9NZM1 2061 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 CCL1P22362 96 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 TCTEX1D4Q5JR98 221 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 IL36BQ9NZH7 164 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 IGHV3-64A0A075B6Q5 118 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 PSME4Q14997 1843 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE7O76087 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAS1P54826 345 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 SEC11AP67812 179 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 CHTOPQ9Y3Y2 248 aaKnown RBP11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 ASXL3Q9C0F0 2248 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 ATP5G3P48201 142 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 VPREB3Q9UKI3 123 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 AZU1P20160 251 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 RP1P56715 2156 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE1Q13065 139 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE4Q13068 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE5Q13069 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 OVOL2Q9BRP0 275 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 SCRT1Q9BWW7 348 aa11.67□□□□□ -0.54
ZC3H4-201ENST00000253048 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 SNAI2O43623 268 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 CD5LO43866 347 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 DANCRP0C864 163 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 SLC17A3O00476 420 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 IFITM2Q01629 132 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 EFNB3Q15768 340 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 DERL1Q9BUN8 251 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 ELANEP08246 267 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 MGST2Q99735 147 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
ZC3H4-201ENST00000253048 LINC01549A6NIU2 74 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 ESDP10768 282 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 HGFACQ04756 655 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 TRGV9Q99603 122 aa11.65□□□□□ -0.54
ZC3H4-201ENST00000253048 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms