RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 Q6ZWC4 215 aa18■□□□□ 0.47
SDF2L1-201ENST00000248958 STPG3Q8N7X2 389 aa18■□□□□ 0.47
SDF2L1-201ENST00000248958 LYRM2Q9NU23 88 aaPredicted RBP18■□□□□ 0.47
SDF2L1-201ENST00000248958 TP53TG1Q9Y2A0 90 aa18■□□□□ 0.47
SDF2L1-201ENST00000248958 RLN2P04090 185 aa17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 S100A7AQ86SG5 101 aa17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 FAM24BQ8N5W8 94 aa17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 TMEM147Q9BVK8 224 aa17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 RETNQ9HD89 108 aa17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 HUWE1Q7Z6Z7 4374 aaKnown RBP17.99■□□□□ 0.47
SDF2L1-201ENST00000248958 KMT2CQ8NEZ4 4911 aaKnown RBP17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 FAM24AA6NFZ4 105 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 RPL35AP18077 110 aaKnown RBP17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 ORM2P19652 201 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 GATA2P23769 480 aaPredicted RBP17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 PLP1P60201 277 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 SNRPD3P62318 126 aaKnown RBP17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 ARL16Q0P5N6 197 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 ZNF124Q15973 351 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 TMEM182Q6ZP80 229 aaPredicted RBP17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 OR8I2Q8N0Y5 310 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 EDA2RQ9HAV5 297 aa17.98■□□□□ 0.47
SDF2L1-201ENST00000248958 C3orf84H3BNL1 204 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 PTTG1O95997 202 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 ZNF688P0C7X2 276 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 SLC38A11Q08AI6 406 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 LEMD1Q68G75 181 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 STX12Q86Y82 276 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 OR1B1Q8NGR6 318 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 CSTL1Q9H114 145 aa17.97■□□□□ 0.47
SDF2L1-201ENST00000248958 SSNA1O43805 119 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 S100A11P31949 105 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 SULT1A1P50225 295 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 RAP2BP61225 183 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 PXDC1Q5TGL8 231 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 STHQ8IWL8 128 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 TMEM252Q8N6L7 170 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 GPR82Q96P67 336 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 RNF24Q9Y225 148 aa17.96■□□□□ 0.47
SDF2L1-201ENST00000248958 ZNF98A6NK75 572 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 SIX6O95475 246 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 LINC00869P0C866 280 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 HBG1P69891 147 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 HBG2P69892 147 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 SAMD13Q5VXD3 122 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 ZNF546Q86UE3 836 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 OVOL2Q9BRP0 275 aa17.95■□□□□ 0.46
SDF2L1-201ENST00000248958 HYPMO75409 117 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 CST7O76096 145 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 ID1P41134 155 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 GALR1P47211 349 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 RAB31Q13636 194 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 MUC7Q8TAX7 377 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 HIGD1AQ9Y241 93 aa17.94■□□□□ 0.46
SDF2L1-201ENST00000248958 E5RGE8 158 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 AGPAT2O15120 278 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 SPRY2O43597 315 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 MEOX2P50222 304 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 ATP6V1FQ16864 119 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 PSMG4Q5JS54 123 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 TMEM217Q8N7C4 229 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 UQCC1Q9NVA1 299 aa17.93■□□□□ 0.46
SDF2L1-201ENST00000248958 VWC2Q2TAL6 325 aa17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 DEFB135Q30KP9 77 aa17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 RNF183Q96D59 192 aa17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 SLC25A39Q9BZJ4 359 aaPredicted RBP17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 SLC25A31Q9H0C2 315 aa17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 SLC25A22Q9H936 323 aa17.92■□□□□ 0.46
SDF2L1-201ENST00000248958 IGSF23A1L1A6 192 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 H3BRN7 92 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 H2BFSP57053 126 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 MORN3Q6PF18 240 aaPredicted RBP17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 SHANK2-AS3Q9BTD1 123 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 SLC25A32Q9H2D1 315 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 DOK5Q9P104 306 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 NBEAL2Q6ZNJ1 2754 aa17.91■□□□□ 0.46
SDF2L1-201ENST00000248958 OR5G3P0C626 314 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 PET100P0DJ07 73 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 SPP1P10451 314 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 PSMB3P49720 205 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 LRRC37A5PQ49AS3 106 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 TMEM41BQ5BJD5 291 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 TRPT1Q86TN4 253 aaKnown RBP17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 GATAD1Q8WUU5 269 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 MGST2Q99735 147 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 ARL6Q9H0F7 186 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 WDR83OSQ9Y284 106 aa17.9■□□□□ 0.46
SDF2L1-201ENST00000248958 CAMLGP49069 296 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 ACTL10Q5JWF8 245 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 IL17DQ8TAD2 202 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 PPP1R1CQ8WVI7 109 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 STAB2Q8WWQ8 2551 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 TENM3Q9P273 2699 aa17.89■□□□□ 0.45
SDF2L1-201ENST00000248958 ISLRO14498 428 aa17.88■□□□□ 0.45
SDF2L1-201ENST00000248958 SOCS3O14543 225 aa17.88■□□□□ 0.45
SDF2L1-201ENST00000248958 RPL7P18124 248 aaKnown RBP17.88■□□□□ 0.45
SDF2L1-201ENST00000248958 ARV1Q9H2C2 271 aa17.88■□□□□ 0.45
SDF2L1-201ENST00000248958 ELOA3CA0A087WX78 387 aaPredicted RBP17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 KNCNA6PVL3 124 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 MPDU1O75352 247 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms