RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SOCS3O14543 225 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 FAM57AQ8TBR7 257 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 PPDPFLQ8WWR9 84 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 CENPVL1A0A0U1RR11 272 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 GREM1O60565 184 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 SELLP14151 372 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 PEBP1P30086 187 aaKnown RBP9.26□□□□□ -0.93
MSH6-201ENST00000234420 MRPL23Q16540 153 aaKnown RBP9.26□□□□□ -0.93
MSH6-201ENST00000234420 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 FABP5P3A8MUU1 101 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 MORN5Q5VZ52 161 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 ZIC4Q8N9L1 334 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 IFI27L2Q9H2X8 130 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 MGAMO43451 1857 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 DEFB105AQ8NG35 78 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 NDUFA2O43678 99 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 IGLV3-25P01717 112 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 RFPL3SP0C7P2 107 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
MSH6-201ENST00000234420 D6R8Y8 96 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 EDIL3O43854 480 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 CD55P08174 381 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 BRK1Q8WUW1 75 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
MSH6-201ENST00000234420 C1orf100Q5SVJ3 147 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 TMEM52Q8NDY8 209 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 TEX38Q6PEX7 206 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 RCHY1Q96PM5 261 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 PARP14Q460N5 1801 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 LOC102723996A0A087X1L8 192 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 MESP2Q0VG99 397 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 VN1R4Q7Z5H5 301 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 STPG4Q8N801 248 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 TGFBR3LH3BV60 316 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 CCL3L1P16619 93 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 RUSC1-AS1Q66K80 236 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 FAM216BQ8N7L0 139 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 OR9G1Q8NH87 305 aa9.24□□□□□ -0.93
MSH6-201ENST00000234420 FAM186AA6NE01 2351 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 LEPROTO15243 131 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 ZNF138P52744 262 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 RNF126Q9BV68 326 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 Q96M66 194 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
MSH6-201ENST00000234420 CD200R1LQ6Q8B3 271 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 ARHGAP21Q5T5U3 1957 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 TRBV24-1A0A075B6N3 115 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 A0A1W2PQD3 144 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 PPBPP02775 128 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 OVOL2Q9BRP0 275 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 TRBV5-7A0A0A0MS05 114 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 CRYBA4P53673 196 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 CFHR5Q9BXR6 569 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 PYYP10082 97 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 ASPHD2Q6ICH7 369 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 UBL5Q9BZL1 73 aa9.23□□□□□ -0.93
MSH6-201ENST00000234420 ANKRD29Q8N6D5 301 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 DPM3Q9P2X0 92 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 RNF114Q9Y508 228 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 TRBV5-3A0A0A0MS03 114 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 DAD1P61803 113 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 ZNF474Q6S9Z5 364 aaPredicted RBP9.22□□□□□ -0.93
MSH6-201ENST00000234420 UBR3Q6ZT12 1888 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 F8W1H4 67 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 ZC2HC1BQ5TFG8 222 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 SLAQ13239 276 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 PLEKHB2Q96CS7 222 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 RTBDNQ9BSG5 229 aaPredicted RBP9.22□□□□□ -0.93
MSH6-201ENST00000234420 H3BUX3 64 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 RHOGP84095 191 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 LILRA6Q6PI73 481 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 COX14Q96I36 57 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 TIMP3P35625 211 aa9.22□□□□□ -0.93
MSH6-201ENST00000234420 PAX1P15863 534 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 PRSS57Q6UWY2 283 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 SAXO1Q8IYX7 474 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 OTORQ9NRC9 128 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 BAALCQ8WXS3 180 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 PLAC1Q9HBJ0 212 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 TNCP24821 2201 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 FREM1Q5H8C1 2179 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 PSPNO60542 156 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 IGKV1D-16P01601 117 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 FAM27BQ5VT28 67 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 ASCL2Q99929 193 aa9.21□□□□□ -0.93
MSH6-201ENST00000234420 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 MYOD1P15172 320 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 GZMMP51124 257 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms