RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SIVA1O15304 175 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 PDE6HQ13956 83 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 SLC25A45Q8N413 288 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 C18orf32Q8TCD1 76 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 CCL21O00585 134 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 ZIC4Q8N9L1 334 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 BRCA1P38398 1863 aaKnown RBP6.8□□□□□ -1.32
APOB-201ENST00000233242 VCYO14598 125 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 DEFB124Q8NES8 71 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 IFITM1P13164 125 aa6.8□□□□□ -1.32
APOB-201ENST00000233242 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 LRRC37AA6NMS7 1700 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 IGHV2-26A0A0B4J1V2 119 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 MESP2Q0VG99 397 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 SPATA31B1PQ5VZV4 182 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 DEFB123Q8N688 67 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 PIMREGQ9BSJ6 248 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 COX8AP10176 69 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 NAA38Q9BRA0 125 aaKnown RBP6.79□□□□□ -1.32
APOB-201ENST00000233242 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 SAP25Q8TEE9 199 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 CD7P09564 240 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 LOC285556D6RIA3 1793 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 ZNF831Q5JPB2 1677 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 TGFBR3LH3BV60 316 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
APOB-201ENST00000233242 CACNA1AO00555 2505 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 ANAPC10Q9UM13 185 aa6.79□□□□□ -1.32
APOB-201ENST00000233242 KIR2DL5BA0A0G2JN68 375 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 KIR2DL5BA0A0G2JPC4 375 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGKV1D-33P01593 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGKV1-33P01594 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 CDKN1AP38936 164 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 KIR2DL5AQ8N109 375 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 KMT2EQ8IZD2 1858 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 APOBEC3AP31941 199 aaPredicted RBP6.78□□□□□ -1.32
APOB-201ENST00000233242 SLAQ13239 276 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 Q6ZWC4 215 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 PPP1R32Q7Z5V6 425 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 ZNF784Q8NCA9 323 aaPredicted RBP6.78□□□□□ -1.32
APOB-201ENST00000233242 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 C9JQL5 133 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 FAM216BQ8N7L0 139 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 FOXL2P58012 376 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGHV3OR16-13A0A075B7E8 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGHV3-74A0A0B4J1X5 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 DCTN5Q9BTE1 182 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 CTSBP07858 339 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 DPH3P1Q9H4G8 78 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 ZNF71Q9NQZ8 489 aaPredicted RBP6.78□□□□□ -1.32
APOB-201ENST00000233242 IGKV1-12A0A0C4DH73 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGKV1D-12P01611 117 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 SPEM2Q0P670 501 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 CDCP2Q5VXM1 449 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 GPR179Q6PRD1 2367 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 IGKV3OR2-268A0A0C4DH90 116 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 C15orf62A8K5M9 175 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 CITED1Q99966 193 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 PMVKQ15126 192 aa6.78□□□□□ -1.32
APOB-201ENST00000233242 ZNF319Q9P2F9 582 aa6.77□□□□□ -1.32
APOB-201ENST00000233242 EVI2AP22794 236 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 UTF1Q5T230 341 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 TMEM167AQ8TBQ9 72 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 RPUSD1Q9UJJ7 312 aaKnown RBP6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 LEPROTO15243 131 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 ZNHIT1O43257 154 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE7O76087 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE12FP0CL80 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE12GP0CL81 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE12IP0CL82 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 GAGE4Q13068 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 DMRTA2Q96SC8 542 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 C2CD3Q4AC94 2353 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 IGLV3-19P01714 112 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 RFPL3SP0C7P2 107 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 IMMP1LQ96LU5 166 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 KLHDC3Q9BQ90 382 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
APOB-201ENST00000233242 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 LILRA1O75019 489 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 A0A1W2PR77 199 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 TSSC4Q9Y5U2 329 aaPredicted RBP6.77□□□□□ -1.33
APOB-201ENST00000233242 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 FOXF2Q12947 444 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 H3BMM0 161 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 ETDBQ3ZM63 59 aa6.77□□□□□ -1.33
APOB-201ENST00000233242 Q86TA4 180 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms