RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ATP6V1FQ16864 119 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 OR1B1Q8NGR6 318 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 CITED4Q96RK1 184 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 TMEM231Q9H6L2 316 aa10.73□□□□□ -0.69
SUPT4H1-201ENST00000225504 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 SELENOTP62341 195 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 ZNF124Q15973 351 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 LEMD1Q68G75 181 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 THAP6Q8TBB0 222 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 PPP1R14BQ96C90 147 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
SUPT4H1-201ENST00000225504 RBMY1BA6NDE4 496 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 RBMY1EA6NEQ0 496 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 A8MZ25 164 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 HYPMO75409 117 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 CD5P06127 495 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 OR5G3P0C626 314 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 RBMY1DP0C7P1 496 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 PET100P0DJ07 73 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 CAMLGP49069 296 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 PLP1P60201 277 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 BAXQ07812 192 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 MIC13Q5XKP0 118 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 SBSPONQ8IVN8 264 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 SMIM3Q9BZL3 60 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 ARL6Q9H0F7 186 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 TUBA4BQ9H853 241 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 HSPB11Q9Y547 144 aa10.71□□□□□ -0.69
SUPT4H1-201ENST00000225504 ZNF98A6NK75 572 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 G3V3Q6 166 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 K7EQG2 157 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 FGF7P21781 194 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 RAP2BP61225 183 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PRR20EP86478 221 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PRR20CP86479 221 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PRR20DP86480 221 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PRR20BP86481 221 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 PRR20AP86496 221 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 SIGLEC15Q6ZMC9 328 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 ZNF546Q86UE3 836 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 APRG1Q8IVJ8 170 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 UHRF2Q96PU4 802 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 SCRT1Q9BWW7 348 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 SRD5A3Q9H8P0 318 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 COL7A1Q02388 2944 aa10.7□□□□□ -0.7
SUPT4H1-201ENST00000225504 HELTA6NFD8 242 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 DCANP1Q8TF63 244 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 C17orf77Q96MU5 243 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 SHANK2-AS3Q9BTD1 123 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 SLC25A39Q9BZJ4 359 aaPredicted RBP10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 SLC25A22Q9H936 323 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
SUPT4H1-201ENST00000225504 SMLR1H3BR10 107 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 RAB31Q13636 194 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 OPCMLQ14982 345 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 C1orf194Q5T5A4 169 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 MORN5Q5VZ52 161 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 OR8I2Q8N0Y5 310 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 OR2T35Q8NGX2 323 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 SLC25A32Q9H2D1 315 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 PFDN2Q9UHV9 154 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 TRAV2A0A0B4J234 112 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 H3BRN7 92 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 RPL29P47914 159 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 AP2S1P53680 142 aaPredicted RBP10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 DEFB131AP59861 70 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 Q6ZNX1 250 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 ARV1Q9H2C2 271 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 SLC39A9Q9NUM3 307 aa10.68□□□□□ -0.7
SUPT4H1-201ENST00000225504 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 NUP62P37198 522 aaPredicted RBP10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 FGL1Q08830 312 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 HAGHQ16775 308 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 GCSAMLQ5JQS6 135 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 ASB13Q8WXK3 278 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 ATP5SQ99766 215 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 RSG1Q9BU20 258 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 DNAJC4Q9NNZ3 241 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 NRN1Q9NPD7 142 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 PXMP4Q9Y6I8 212 aa10.67□□□□□ -0.7
SUPT4H1-201ENST00000225504 DNAH9Q9NYC9 4486 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 FXYD6-FXYD2A0A087WZ82 144 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
SUPT4H1-201ENST00000225504 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms