RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 ZNF207O43670 478 aaKnown RBP10.3□□□□□ -0.76
UPK1A-201ENST00000222275 HYPMO75409 117 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 LINC00869P0C866 280 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 RPL29P47914 159 aaKnown RBP10.3□□□□□ -0.76
UPK1A-201ENST00000222275 LYZP61626 148 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 PPP1R14BQ96C90 147 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 ZNF414Q96IQ9 312 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 MGST2Q99735 147 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 ASCL2Q99929 193 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 WDR61Q9GZS3 305 aaKnown RBP10.3□□□□□ -0.76
UPK1A-201ENST00000222275 MFFQ9GZY8 342 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 VSIRQ9H7M9 311 aa10.3□□□□□ -0.76
UPK1A-201ENST00000222275 BORCS7-ASMTA0A0B4J1R7 106 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 HELTA6NFD8 242 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 ARPC5O15511 151 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 ZNF345Q14585 488 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 USF2Q15853 346 aaPredicted RBP10.29□□□□□ -0.76
UPK1A-201ENST00000222275 C1orf194Q5T5A4 169 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 OR1L4Q8NGR5 311 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 ST6GAL2Q96JF0 529 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 PFDN5Q99471 154 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 NPCDR1Q9BY65 106 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 FBXL17Q9UF56 701 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 U3KQE9 123 aa10.29□□□□□ -0.76
UPK1A-201ENST00000222275 A0A0D9SG52 128 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 G3V3Q6 166 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 ORM2P19652 201 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 B2MP61769 119 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 OPCMLQ14982 345 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
UPK1A-201ENST00000222275 ADAMTSL5Q6ZMM2 481 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 OR1B1Q8NGR6 318 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 MLXQ9UH92 298 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 HIGD1AQ9Y241 93 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
UPK1A-201ENST00000222275 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
UPK1A-201ENST00000222275 RNF222A6NCQ9 220 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 TSPAN4O14817 238 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 BUB3O43684 328 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 OR5G3P0C626 314 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 GATA2P23769 480 aaPredicted RBP10.27□□□□□ -0.77
UPK1A-201ENST00000222275 PRR20EP86478 221 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 PRR20CP86479 221 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 PRR20DP86480 221 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 PRR20BP86481 221 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 PRR20AP86496 221 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 ST8SIA2Q92186 375 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 HYLS1Q96M11 299 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 GPR82Q96P67 336 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
UPK1A-201ENST00000222275 ARL6Q9H0F7 186 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
UPK1A-201ENST00000222275 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 SMLR1H3BR10 107 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 JTBO76095 146 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 C1QBP02746 253 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
UPK1A-201ENST00000222275 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
UPK1A-201ENST00000222275 TMEM61Q8N0U2 210 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 GATAD1Q8WUU5 269 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 RNF2Q99496 336 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 ARV1Q9H2C2 271 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
UPK1A-201ENST00000222275 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 TRAV2A0A0B4J234 112 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
UPK1A-201ENST00000222275 GP9P14770 177 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 RPL11P62913 178 aaKnown RBP10.25□□□□□ -0.77
UPK1A-201ENST00000222275 EIF5AP63241 154 aaKnown RBP10.25□□□□□ -0.77
UPK1A-201ENST00000222275 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 C10orf113Q5VZT2 155 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 OR8I2Q8N0Y5 310 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 Q8N1Y9 231 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 KCNRGQ8N5I3 272 aa10.25□□□□□ -0.77
UPK1A-201ENST00000222275 GNPNAT1Q96EK6 184 aaPredicted RBP10.25□□□□□ -0.77
UPK1A-201ENST00000222275 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 KANTRA0A1W2PQU2 76 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 ZNF98A6NK75 572 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
UPK1A-201ENST00000222275 EDN2P20800 178 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 C4BPBP20851 252 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
UPK1A-201ENST00000222275 OR11H4Q8NGC9 324 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms