RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 IL34Q6ZMJ4 242 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 OR1B1Q8NGR6 318 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 METTL26Q96S19 204 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 RFNGQ9Y644 331 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 TENM3Q9P273 2699 aa12.45□□□□□ -0.42
LIM2-201ENST00000221973 IGHV3OR16-13A0A075B7E8 117 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 IGHV3-74A0A0B4J1X5 117 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 JTBO76095 146 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 FOLR2P14207 255 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 CBLN1P23435 193 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 NPPCP23582 126 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 B2MP61769 119 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 LAMTOR1Q6IAA8 161 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 ADAMTSL5Q6ZMM2 481 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 Q6ZRG5 221 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
LIM2-201ENST00000221973 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
LIM2-201ENST00000221973 IGHV3-66A0A0C4DH42 116 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 HYPMO75409 117 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 SAP30O75446 220 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
LIM2-201ENST00000221973 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIM2-201ENST00000221973 OR5G3P0C626 314 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 ATP6V0CP27449 155 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 KCNIP2Q9NS61 270 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 MRPL27Q9P0M9 148 aaKnown RBP12.43□□□□□ -0.42
LIM2-201ENST00000221973 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
LIM2-201ENST00000221973 COX7A2P2O60397 106 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 CRYBB3P26998 211 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 PLP1P60201 277 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 MARC2Q969Z3 335 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 PPP1R14BQ96C90 147 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 MCRIP2Q9BUT9 160 aaKnown RBP12.42□□□□□ -0.42
LIM2-201ENST00000221973 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 SMPXQ9UHP9 88 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 HIGD1AQ9Y241 93 aa12.42□□□□□ -0.42
LIM2-201ENST00000221973 C8orf88P0DMB2 117 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 C9orf66Q5T8R8 295 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 PXDC1Q5TGL8 231 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 PATE2Q6UY27 113 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 DYNLRB2Q8TF09 96 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 ST8SIA2Q92186 375 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 NARS2Q96I59 477 aaKnown RBP12.41□□□□□ -0.42
LIM2-201ENST00000221973 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 ARV1Q9H2C2 271 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 TIMM9Q9Y5J7 89 aa12.41□□□□□ -0.42
LIM2-201ENST00000221973 CHEK1O14757 476 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 OR1L4Q8NGR5 311 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 TMEM37Q8WXS4 190 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 GNPNAT1Q96EK6 184 aaPredicted RBP12.4□□□□□ -0.42
LIM2-201ENST00000221973 UHRF2Q96PU4 802 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 DNAJC4Q9NNZ3 241 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 SIGLEC8Q9NYZ4 499 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 MLXQ9UH92 298 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 U3KQE9 123 aa12.4□□□□□ -0.42
LIM2-201ENST00000221973 ELOA3CA0A087WX78 387 aaPredicted RBP12.39□□□□□ -0.43
LIM2-201ENST00000221973 A0A1W2PS18 150 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 C4BPBP20851 252 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 OR2G3Q8NGZ4 309 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 PFDN5Q99471 154 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
LIM2-201ENST00000221973 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
LIM2-201ENST00000221973 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
LIM2-201ENST00000221973 BUB3O43684 328 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
LIM2-201ENST00000221973 BMI1P35226 326 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 EIF5AP63241 154 aaKnown RBP12.38□□□□□ -0.43
LIM2-201ENST00000221973 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 LINC00305Q7Z4B0 112 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 RNF2Q99496 336 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 VSIRQ9H7M9 311 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
LIM2-201ENST00000221973 ZNF98A6NK75 572 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 H3BRN7 92 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 S100A7P31151 101 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 INSL3P51460 131 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
LIM2-201ENST00000221973 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
LIM2-201ENST00000221973 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 S100A7AQ86SG5 101 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 BAP18Q8IXM2 172 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
LIM2-201ENST00000221973 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms