RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 MOGAT3Q86VF5 341 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 TMEM167AQ8TBQ9 72 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 HSPB8Q9UJY1 196 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 DYSFO75923 2080 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 TRAV5A0A0B4J249 113 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 IGHV1-24A0A0C4DH33 117 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 C19orf71A6NCJ1 209 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
SF3A2-201ENST00000221494 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 BVES-AS1Q5T3Y7 98 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 MORN5Q5VZ52 161 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 RBPMS2Q6ZRY4 209 aaKnown RBP12.82□□□□□ -0.36
SF3A2-201ENST00000221494 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 RNF7Q9UBF6 113 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 POLEQ07864 2286 aa12.82□□□□□ -0.36
SF3A2-201ENST00000221494 TAX1BP3O14907 124 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 CD5LO43866 347 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 MC5RP33032 325 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 GLRXP35754 106 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 LINC00479Q96M42 142 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 MAP1LC3CQ9BXW4 147 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 TPRP12270 2363 aaKnown RBP12.81□□□□□ -0.36
SF3A2-201ENST00000221494 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 TRBV6-1A0A0K0K1D8 114 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 CBY3A6NI87 242 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 H0Y8G0 127 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 C16orf97H3BN30 126 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 LTAP01374 205 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 CAMPP49913 170 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 ARF6P62330 175 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
SF3A2-201ENST00000221494 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 ZCCHC24Q8N2G6 241 aaKnown RBP12.81□□□□□ -0.36
SF3A2-201ENST00000221494 OR5AN1Q8NGI8 311 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 DPF1Q92782 380 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 SCRT2Q9NQ03 307 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 PRR14LQ5THK1 2151 aa12.81□□□□□ -0.36
SF3A2-201ENST00000221494 hADV38S2A0JD32 116 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 M0R1B8 84 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 IGKV1-16P04430 117 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 PYYP10082 97 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 COL8A2P25067 703 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 PAX2Q02962 417 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 PVRIGQ6DKI7 326 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 ZNF788Q6ZQV5 615 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 SPATA12Q7Z6I5 190 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 GATD1Q8NB37 220 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 HARBI1Q96MB7 349 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 GAFA1Q96PS6 74 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 DSCAMO60469 2012 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 VWC2LB2RUY7 222 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 P01737 135 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
SF3A2-201ENST00000221494 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
SF3A2-201ENST00000221494 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
SF3A2-201ENST00000221494 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 UTF1Q5T230 341 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 C8orf31Q8N9H6 132 aa12.8□□□□□ -0.36
SF3A2-201ENST00000221494 LOC102724200A0A096LPH7 203 aaPredicted RBP12.79□□□□□ -0.36
SF3A2-201ENST00000221494 HAX1O00165 279 aa12.79□□□□□ -0.36
SF3A2-201ENST00000221494 MLANAQ16655 118 aa12.79□□□□□ -0.36
SF3A2-201ENST00000221494 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
SF3A2-201ENST00000221494 TRGV9Q99603 122 aa12.79□□□□□ -0.36
SF3A2-201ENST00000221494 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
SF3A2-201ENST00000221494 ACACBO00763 2458 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 A0A1B0GW15 77 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 KALRNO60229 2985 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 PLP1P60201 277 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 PRR27Q6MZM9 219 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 OR10W1Q8NGF6 305 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 H1FXQ92522 213 aaKnown RBP12.78□□□□□ -0.36
SF3A2-201ENST00000221494 NUDT3O95989 172 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 FOXA3P55318 350 aaPredicted RBP12.78□□□□□ -0.36
SF3A2-201ENST00000221494 ADIPOQQ15848 244 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 LINC01545Q5VT33 79 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 TEX36Q5VZQ5 186 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 LINC00305Q7Z4B0 112 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
SF3A2-201ENST00000221494 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
SF3A2-201ENST00000221494 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.36
SF3A2-201ENST00000221494 CCL21O00585 134 aa12.77□□□□□ -0.37
SF3A2-201ENST00000221494 THBDP07204 575 aa12.77□□□□□ -0.37
SF3A2-201ENST00000221494 SEC11AP67812 179 aa12.77□□□□□ -0.37
SF3A2-201ENST00000221494 MSMPQ1L6U9 139 aa12.77□□□□□ -0.37
SF3A2-201ENST00000221494 DAZAP1Q96EP5 407 aaKnown RBP12.77□□□□□ -0.37
SF3A2-201ENST00000221494 CST9LQ9H4G1 147 aa12.77□□□□□ -0.37
SF3A2-201ENST00000221494 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.37
SF3A2-201ENST00000221494 RELNP78509 3460 aa12.76□□□□□ -0.37
SF3A2-201ENST00000221494 CORTO00230 105 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms