RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 COX11Q9Y6N1 276 aa17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 CNOT1A5YKK6 2376 aaKnown RBP17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 IGHV1-24A0A0C4DH33 117 aa17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 RPL27AP46776 148 aaKnown RBP17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 SH2D7A6NKC9 451 aaPredicted RBP17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 FOXA3P55318 350 aaPredicted RBP17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 NDFIP1Q9BT67 221 aa17.68■□□□□ 0.42
HTATSF1-201ENST00000218364 CCL25O15444 150 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 IGHV1-8P0DP01 117 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 DAZAP1Q96EP5 407 aaKnown RBP17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 ST20Q9HBF5 79 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 KAAG1Q9UBP8 84 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 OR4C46A6NHA9 309 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 SYS1-DBNDD2H3BUS1 97 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 ENSAO43768 121 aaKnown RBP17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 UNQ5815/PRO19632Q6UWF5 114 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 WFDC8Q8IUA0 241 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 CCL17Q92583 94 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 OTORQ9NRC9 128 aa17.67■□□□□ 0.42
HTATSF1-201ENST00000218364 CEP250Q9BV73 2442 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 C16orf97H3BN30 126 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 ZNF738Q8NE65 137 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 LOC102724200A0A096LPH7 203 aaPredicted RBP17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 PRR31Q5SQ13 230 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 C16orf54Q6UWD8 224 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 Q86TA4 180 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 TMEM14CQ9P0S9 112 aa17.66■□□□□ 0.42
HTATSF1-201ENST00000218364 M0QZ24 198 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 CD24P25063 80 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 PTTG1IPP53801 180 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 BSPH1Q075Z2 132 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 LEMD1Q68G75 181 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 HIGD1AQ9Y241 93 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 ZNF835Q9Y2P0 537 aa17.65■□□□□ 0.42
HTATSF1-201ENST00000218364 IGHV3-72A0A0B4J1Y9 119 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 LEPROTL1O95214 131 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 APOHP02749 345 aaPredicted RBP17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 HOXB4P17483 251 aaPredicted RBP17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 UBE2V1Q13404 147 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 TMEM133Q9H2Q1 129 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 F11RQ9Y624 299 aaKnown RBP17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 TRBV6-1A0A0K0K1D8 114 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 H3BTX0 84 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 HAX1O00165 279 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 OR5AL1P0C617 328 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 SIGLEC9Q9Y336 463 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 PLCE1Q9P212 2302 aa17.64■□□□□ 0.41
HTATSF1-201ENST00000218364 IGLV2-11P01706 119 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 THBDP07204 575 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 LINC00173Q6ZV60 143 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 TNFRSF14Q92956 283 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 NAV3Q8IVL0 2385 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 ICE1Q9Y2F5 2266 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 OVOL3O00110 214 aa17.63■□□□□ 0.41
HTATSF1-201ENST00000218364 IGHV3-21A0A0B4J1V1 117 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 Q6ZVH6 145 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 SVILO95425 2214 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 CHEK1O14757 476 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 CNTFRP26992 372 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 TMEM190Q8WZ59 177 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 A0A0G2JNJ9 132 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 TEX22C9J3V5 150 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 LIPFP07098 398 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 IGLC1P0CG04 106 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 COL8A1P27658 744 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 GSX1Q9H4S2 264 aaPredicted RBP17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 Q9UFV3 132 aa17.62■□□□□ 0.41
HTATSF1-201ENST00000218364 PSG1P11464 419 aa17.61■□□□□ 0.41
HTATSF1-201ENST00000218364 CIARTQ8N365 385 aaPredicted RBP17.61■□□□□ 0.41
HTATSF1-201ENST00000218364 K7EM74 188 aa17.61■□□□□ 0.41
HTATSF1-201ENST00000218364 SLC25A39Q9BZJ4 359 aaPredicted RBP17.61■□□□□ 0.41
HTATSF1-201ENST00000218364 APELAP0DMC3 54 aa17.6■□□□□ 0.41
HTATSF1-201ENST00000218364 RNASE6Q93091 150 aaKnown RBP17.6■□□□□ 0.41
HTATSF1-201ENST00000218364 TMEM191AQ9H0A3 160 aa17.6■□□□□ 0.41
HTATSF1-201ENST00000218364 TRAV8-1A0A0A6YYK1 113 aa17.6■□□□□ 0.41
HTATSF1-201ENST00000218364 PET117Q6UWS5 81 aa17.6■□□□□ 0.41
HTATSF1-201ENST00000218364 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 IGLV1-47P01700 117 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 LYZP61626 148 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 ZNF785A8K8V0 405 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 RBPJQ06330 500 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 PPP1R27Q86WC6 154 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 GATD1Q8NB37 220 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 ARFGEF3Q5TH69 2177 aa17.59■□□□□ 0.41
HTATSF1-201ENST00000218364 hDV102S1A0JD36 115 aa17.58■□□□□ 0.4
HTATSF1-201ENST00000218364 I3L2K1 104 aa17.58■□□□□ 0.4
HTATSF1-201ENST00000218364 GOLT1AQ6ZVE7 132 aa17.58■□□□□ 0.4
HTATSF1-201ENST00000218364 PRNTQ86SH4 94 aa17.58■□□□□ 0.4
HTATSF1-201ENST00000218364 VSTM5A8MXK1 200 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 EXOC3-AS1Q8N2X6 119 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 MAP1LC3CQ9BXW4 147 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 IGHV1-3A0A0C4DH29 117 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 IGHV2-70DA0A0C4DH43 119 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 K7EP13 123 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 JKAMPQ9P055 326 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 INSIG2Q9Y5U4 225 aa17.57■□□□□ 0.4
HTATSF1-201ENST00000218364 SLC25A34Q6PIV7 304 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 HSPB8Q9UJY1 196 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 DCHS1Q96JQ0 3298 aa17.56■□□□□ 0.4
HTATSF1-201ENST00000218364 ZFHX4Q86UP3 3567 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms