RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 U3KQE9 123 aa12.87□□□□□ -0.35
PHGDH-227ENST00000641811 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
PHGDH-227ENST00000641811 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 A0A1W2PS18 150 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 CCNKO75909 580 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
PHGDH-227ENST00000641811 OR2F1Q13607 317 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 ZNF124Q15973 351 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 SPATA25Q9BR10 227 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 TMEM231Q9H6L2 316 aa12.86□□□□□ -0.35
PHGDH-227ENST00000641811 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
PHGDH-227ENST00000641811 C5orf51A6NDU8 294 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-227ENST00000641811 IL5P05113 134 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 CD5P06127 495 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 PAFAH1B2P68402 229 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 OR8G2PQ6IF36 304 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 FAM24BQ8N5W8 94 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 RNF125Q96EQ8 232 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
PHGDH-227ENST00000641811 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
PHGDH-227ENST00000641811 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-227ENST00000641811 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 C16orf54Q6UWD8 224 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 THAP8Q8NA92 274 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 STXBP6Q8NFX7 210 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 RAB40CQ96S21 281 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 TRGV9Q99603 122 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 RABAC1Q9UI14 185 aa12.84□□□□□ -0.35
PHGDH-227ENST00000641811 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 AKR1C1Q04828 323 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 TMEM14EPQ6UXP3 125 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 MAP6D1Q9H9H5 199 aa12.83□□□□□ -0.36
PHGDH-227ENST00000641811 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
PHGDH-227ENST00000641811 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
PHGDH-227ENST00000641811 RPL35AP18077 110 aaKnown RBP12.82□□□□□ -0.36
PHGDH-227ENST00000641811 TAS2R30P59541 319 aa12.82□□□□□ -0.36
PHGDH-227ENST00000641811 LYZP61626 148 aa12.82□□□□□ -0.36
PHGDH-227ENST00000641811 RRAS2P62070 204 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-227ENST00000641811 SNRPGP15A8MWD9 76 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 K7EPK0 472 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 K7EQG2 157 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 BUB3O43684 328 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 TSC22D2O75157 780 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 FABP1P07148 127 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-227ENST00000641811 EIF2B2P49770 351 aaKnown RBP12.81□□□□□ -0.36
PHGDH-227ENST00000641811 ARL16Q0P5N6 197 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 GSG1LQ6UXU4 331 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 TMEM182Q6ZP80 229 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-227ENST00000641811 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
PHGDH-227ENST00000641811 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-227ENST00000641811 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 L7N2F9 121 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 SIX6O95475 246 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-227ENST00000641811 DEFA1P59665 94 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 DEFA3P59666 94 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 DEFB131AP59861 70 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 VAMP2P63027 116 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 LEMD1Q68G75 181 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 TMEM144Q7Z5S9 345 aa12.8□□□□□ -0.36
PHGDH-227ENST00000641811 HELTA6NFD8 242 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 S100A10P60903 97 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 DLK1P80370 383 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 IL15RAQ13261 267 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 RAB32Q13637 225 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 OR10P1Q8NGE3 313 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 DCANP1Q8TF63 244 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 MARVELD1Q9BSK0 173 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
PHGDH-227ENST00000641811 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
PHGDH-227ENST00000641811 BCAP31P51572 246 aa12.78□□□□□ -0.36
PHGDH-227ENST00000641811 SIGLEC15Q6ZMC9 328 aa12.78□□□□□ -0.36
PHGDH-227ENST00000641811 FAM24AA6NFZ4 105 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 GOSR2O14653 212 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 PRAF2O60831 178 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 CAV2P51636 162 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 AP2S1P53680 142 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-227ENST00000641811 APOC4P55056 127 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 BPIFCQ8NFQ6 507 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 PPP1R14BQ96C90 147 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 OVOL2Q9BRP0 275 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 EDA2RQ9HAV5 297 aa12.77□□□□□ -0.37
PHGDH-227ENST00000641811 CST7O76096 145 aa12.76□□□□□ -0.37
PHGDH-227ENST00000641811 ORM2P19652 201 aa12.76□□□□□ -0.37
PHGDH-227ENST00000641811 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
PHGDH-227ENST00000641811 MGAT4CQ9UBM8 478 aa12.76□□□□□ -0.37
PHGDH-227ENST00000641811 PFDN2Q9UHV9 154 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms