RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HSD17B11Q8NBQ5 300 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 OR11H4Q8NGC9 324 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 METTL26Q96S19 204 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
PHGDH-218ENST00000641491 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 PUS1Q9Y606 427 aaKnown RBP eCLIP10□□□□□ -0.81
PHGDH-218ENST00000641491 MGAM2Q2M2H8 2515 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 G3V3Q6 166 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 AGPAT2O15120 278 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 CTSGP08311 255 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 LINC00869P0C866 280 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 CD33P20138 364 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 B2MP61769 119 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 CD300CQ08708 224 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 KIAA0141Q14154 515 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-218ENST00000641491 PXDC1Q5TGL8 231 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 HIST2H2BDQ6DRA6 164 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 OR1B1Q8NGR6 318 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 GRAMD2BQ96HH9 432 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 RAX2Q96IS3 184 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 DUX3Q96PT4 197 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 PFDN5Q99471 154 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 CHRDL1Q9BU40 450 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 PARD6GQ9BYG4 376 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-218ENST00000641491 RABAC1Q9UI14 185 aa9.99□□□□□ -0.81
PHGDH-218ENST00000641491 MBP02144 154 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 OR5G3P0C626 314 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 ORM2P19652 201 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 CXCL2P19875 107 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 SLURP1P55000 103 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 KRTAP10-3P60369 221 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
PHGDH-218ENST00000641491 GPHB5Q86YW7 130 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 MRPL36Q9P0J6 103 aaKnown RBP9.98□□□□□ -0.81
PHGDH-218ENST00000641491 PXMP4Q9Y6I8 212 aa9.98□□□□□ -0.81
PHGDH-218ENST00000641491 A0A1W2PS18 150 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 OVOL1O14753 267 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 HYPMO75409 117 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 PSG1P11464 419 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 NPPCP23582 126 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 NKX2-5P52952 324 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-218ENST00000641491 ELLP55199 621 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-218ENST00000641491 ZNF90Q03938 601 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 OPCMLQ14982 345 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 ACOT6Q3I5F7 207 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-218ENST00000641491 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 SLC51BQ86UW2 128 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 STPG3Q8N7X2 389 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 MGST2Q99735 147 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 MCRIP2Q9BUT9 160 aaKnown RBP9.97□□□□□ -0.81
PHGDH-218ENST00000641491 GPR61Q9BZJ8 451 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 DAZ1Q9NQZ3 744 aaKnown RBP9.97□□□□□ -0.81
PHGDH-218ENST00000641491 DOK5Q9P104 306 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 HIGD1AQ9Y241 93 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
PHGDH-218ENST00000641491 ELOA3CA0A087WX78 387 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-218ENST00000641491 BOLA2-SMG1P6H3BVE0 249 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 RPL29P47914 159 aaKnown RBP9.96□□□□□ -0.82
PHGDH-218ENST00000641491 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 REC114Q7Z4M0 266 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 C9orf62Q8N4C0 152 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 OR2G3Q8NGZ4 309 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 RNF2Q99496 336 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 RSG1Q9BU20 258 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 GGTLC1Q9BX51 225 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 SLC39A9Q9NUM3 307 aa9.96□□□□□ -0.82
PHGDH-218ENST00000641491 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.82
PHGDH-218ENST00000641491 A0A1W2PPV4 95 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 F8W735 103 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-218ENST00000641491 LGALS9O00182 355 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 SAP30O75446 220 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 ADMP35318 185 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 LGALSLQ3ZCW2 172 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-218ENST00000641491 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 OR9G4Q8NGQ1 327 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 MARC2Q969Z3 335 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 PSMG3Q9BT73 122 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-218ENST00000641491 SLC25A32Q9H2D1 315 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
PHGDH-218ENST00000641491 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
PHGDH-218ENST00000641491 IGKV1OR2-108A0A075B7D4 117 aa9.94□□□□□ -0.82
PHGDH-218ENST00000641491 IGHV3OR16-8A0A075B7F1 116 aa9.94□□□□□ -0.82
PHGDH-218ENST00000641491 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
PHGDH-218ENST00000641491 GATA2P23769 480 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-218ENST00000641491 ATP6V0CP27449 155 aa9.94□□□□□ -0.82
PHGDH-218ENST00000641491 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms