RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 K7EPK0 472 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 CCL24O00175 119 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 MYOD1P15172 320 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 AP2S1P53680 142 aaPredicted RBP6.27□□□□□ -1.4
SCARB2-220ENST00000640076 DEFA6Q01524 100 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 PLGLAQ15195 96 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 Q8N9W7 124 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 ZNF738Q8NE65 137 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 OR5B3Q8NH48 314 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 RNASEH2CQ8TDP1 164 aaKnown RBP6.27□□□□□ -1.4
SCARB2-220ENST00000640076 SLC25A33Q9BSK2 321 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 RNF126Q9BV68 326 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 CACFD1Q9UGQ2 172 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 RCL1Q9Y2P8 373 aaKnown RBP6.27□□□□□ -1.4
SCARB2-220ENST00000640076 ZNF257Q9Y2Q1 563 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 LSM5Q9Y4Y9 91 aaKnown RBP6.27□□□□□ -1.4
SCARB2-220ENST00000640076 OR51B2Q9Y5P1 312 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 V9GYY9 64 aa6.27□□□□□ -1.4
SCARB2-220ENST00000640076 NF1P21359 2839 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 TEP1Q99973 2627 aaKnown RBP6.27□□□□□ -1.41
SCARB2-220ENST00000640076 TEX50A0A1B0GTY4 177 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 FCN1O00602 326 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 SSSCA1O60232 199 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 DEDDO75618 318 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 IFNA17P01571 189 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 C1QBP02746 253 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 HSPE1P61604 102 aaKnown RBP6.27□□□□□ -1.41
SCARB2-220ENST00000640076 RPL19P84098 196 aaKnown RBP6.27□□□□□ -1.41
SCARB2-220ENST00000640076 GAGE1Q13065 139 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 LY6EQ16553 131 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 HAGHQ16775 308 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 ZFP69Q49AA0 526 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 C11orf87Q6NUJ2 197 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 OR11H4Q8NGC9 324 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 CLCC1Q96S66 551 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 OR5AC2Q9NZP5 309 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 MOB4Q9Y3A3 225 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 GOLT1BQ9Y3E0 138 aa6.27□□□□□ -1.41
SCARB2-220ENST00000640076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.26□□□□□ -1.41
SCARB2-220ENST00000640076 E7EUB6 86 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 H3BTX0 84 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 PPP1R2P9O14990 202 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 FGF16O43320 207 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 SYNGR2O43760 224 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 CHST1O43916 411 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 HSBP1O75506 76 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 TMEM50AO95807 157 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 CA2P00918 260 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 EGR2P11161 476 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-220ENST00000640076 SLC25A4P12235 298 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 SPINK9Q5DT21 86 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 C10orf55Q5SWW7 151 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 PRSS54Q6PEW0 395 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-220ENST00000640076 SIGLECL1Q8N7X8 197 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 C5orf56Q8N8D9 126 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 OR1L8Q8NGR8 309 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 RBKSQ9H477 322 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 C11orf1Q9H5F2 150 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 AAMDCQ9H7C9 122 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 NDUFA4L2Q9NRX3 87 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 FXYD6-FXYD2A0A087WZ82 144 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 A0A1B0GUS0 222 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 A0A1B0GW64 132 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 HLA-DRB1P01911 266 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 RLN2P04090 185 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 IAPPP10997 89 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 RANP62826 216 aaKnown RBP6.26□□□□□ -1.41
SCARB2-220ENST00000640076 GNB1P62873 340 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 CX3CL1P78423 397 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 PRCDQ00LT1 54 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 C16orf82Q7Z2V1 217 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 TMEM144Q7Z5S9 345 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 RASL11BQ9BPW5 248 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 OR51M1Q9H341 326 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 VPREB3Q9UKI3 123 aa6.26□□□□□ -1.41
SCARB2-220ENST00000640076 CEBPZOSA8MTT3 80 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 INAFM1C9JVW0 142 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 CNIH1O95406 144 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 PVALBP20472 110 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-220ENST00000640076 VDAC2P45880 294 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-220ENST00000640076 RPL27AP46776 148 aaKnown RBP6.25□□□□□ -1.41
SCARB2-220ENST00000640076 PAX9P55771 341 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 SRSF12Q8WXF0 261 aaKnown RBP6.25□□□□□ -1.41
SCARB2-220ENST00000640076 DCUN1D4Q92564 292 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 SMIM8Q96KF7 97 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 HYLS1Q96M11 299 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 PLEKHA3Q9HB20 300 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 TNFRSF19Q9NS68 423 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 WSB1Q9Y6I7 421 aa6.25□□□□□ -1.41
SCARB2-220ENST00000640076 NIPBLQ6KC79 2804 aaeCLIP6.25□□□□□ -1.41
SCARB2-220ENST00000640076 IGHV7-81A0A0B4J1V7 117 aa6.24□□□□□ -1.41
SCARB2-220ENST00000640076 IGLC7A0M8Q6 106 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms