RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809		P0DMU3	169 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	FAM231A	P0DMU4	169 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	FAM231C	P0DMU5	169 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	PI3	P19957	117 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	C4BPB	P20851	252 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	HTR2B	P41595	481 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	SNRPD3	P62318	126 aa	Known RBP	11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	IZUMO4	Q1ZYL8	232 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	AARD	Q4LEZ3	155 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	ACTL10	Q5JWF8	245 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	CCDC71L	Q8N9Z2	235 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	OR52E5	Q8NH55	327 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809		U3KQE9	123 aa		11.42	□□□□□ -0.58
SPIN3-229	ENST00000639809	TRAV6	A0A075B6T7	132 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	KNCN	A6PVL3	124 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	SLC25A4	P12235	298 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	NPY1R	P25929	384 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	SPCS3	P61009	180 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	YPEL3	P61236	119 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	DHRS2	Q13268	280 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	TMED4	Q7Z7H5	227 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	OR1S2	Q8NGQ3	325 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809		Q8WTZ3	238 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	RAB40C	Q96S21	281 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	MARVELD1	Q9BSK0	173 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	CACFD1	Q9UGQ2	172 aa		11.41	□□□□□ -0.58
SPIN3-229	ENST00000639809	DEFB131B	A0A096LNP1	70 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	UCP1	P25874	307 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	UBE2M	P61081	183 aa	Known RBP	11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	C16orf54	Q6UWD8	224 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	POM121L12	Q8N7R1	296 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	RNASE11	Q8TAA1	199 aa	Known RBP	11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	GLMP	Q8WWB7	406 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	NDUFAF3	Q9BU61	184 aa		11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	MRPL36	Q9P0J6	103 aa	Known RBP	11.4	□□□□□ -0.58
SPIN3-229	ENST00000639809	INMT-MINDY4	F8WBC2	141 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	IGLC1	P0CG04	106 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	ANXA7	P20073	488 aa	Known RBP	11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	TIGIT	Q495A1	244 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	PSMG4	Q5JS54	123 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	ETFRF1	Q6IPR1	90 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	NOXA1	Q86UR1	476 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	AGRN	O00468	2067 aa		11.39	□□□□□ -0.59
SPIN3-229	ENST00000639809	TMEM189	A5PLL7	270 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	CRYM-AS1	A6NIL9	109 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	MED14OS	P0DP75	135 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	NUP62	P37198	522 aa	Predicted RBP	11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	MLANA	Q16655	118 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	C12orf74	Q32Q52	190 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	C2orf83	Q53S99	150 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	FAM210B	Q96KR6	192 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	NEU1	Q99519	415 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	NAA60	Q9H7X0	242 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	NRN1	Q9NPD7	142 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	CLEC5A	Q9NY25	188 aa		11.38	□□□□□ -0.59
SPIN3-229	ENST00000639809	KIAA1109	Q2LD37	5005 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	PCLO	Q9Y6V0	5065 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	TEX48	A0A1B0GUV7	120 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809		A0A1B0GVY2	172 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	FAM90A26	D6RGX4	464 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	PRAF2	O60831	178 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	CDS2	O95674	445 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	AKR1C4	P17516	323 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	OR10J1	P30954	320 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	SUPT4H1	P63272	117 aa	Known RBP	11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	DHODH	Q02127	395 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	PPP1R1A	Q13522	171 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	TMEM128	Q5BJH2	165 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	PRSS54	Q6PEW0	395 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	HEYL	Q9NQ87	328 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	PFDN2	Q9UHV9	154 aa		11.37	□□□□□ -0.59
SPIN3-229	ENST00000639809	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	SMIM9	A6NGZ8	99 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809		H3BMM0	161 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	IL5	P05113	134 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	OR4E1	P0C645	316 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	NKX2-1	P43699	371 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	RND2	P52198	227 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	LGALS9B	Q3B8N2	356 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	SP6	Q3SY56	376 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	RBPMS	Q93062	196 aa	Known RBP	11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	SEC22C	Q9BRL7	303 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	TMEM222	Q9H0R3	208 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809	CELA1	Q9UNI1	258 aa		11.36	□□□□□ -0.59
SPIN3-229	ENST00000639809		A0A0G2JRQ6	117 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	BUB3	O43684	328 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	SFT2D2	O95562	160 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	OR5AC1	P0C628	307 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	SPART-AS1	P0CW21	52 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	HLA-DRB4	P13762	266 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	VAMP1	P23763	118 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	C4orf46	Q504U0	113 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	SIGLEC15	Q6ZMC9	328 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809		Q6ZRM9	215 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	SLC24A4	Q8NFF2	622 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms