RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 LINC01587Q99440 93 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 TXNDC17Q9BRA2 123 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF581Q9P0T4 197 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 V9GY05 133 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 NXPH3O95157 252 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 RPL18AQ02543 176 aaKnown RBP3.54□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF678Q5SXM1 525 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-209ENST00000639244 C3orf56Q8N813 242 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 PRSS27Q9BQR3 290 aa3.54□□□□□ -1.84
SCN3A-209ENST00000639244 SNURFLB1AK76 121 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 APOC4P55056 127 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF816Q0VGE8 651 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 HIST2H2BCQ6DN03 193 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 HIST2H2BDQ6DRA6 164 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 C22orf39Q6P5X5 142 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 SEM1Q6ZVN7 128 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 CLECL1Q8IZS7 167 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 AMELYQ99218 206 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 TM2D1Q9BX74 207 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 SPRY4Q9C004 299 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 SCRT2Q9NQ03 307 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PYGO1Q9Y3Y4 419 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 SPTAN1Q13813 2472 aaKnown RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 IGHG1P01857 330 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 ADMP35318 185 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM14EPQ6UXP3 125 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 DAZ1Q9NQZ3 744 aaKnown RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PILRAQ9UKJ1 303 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 COL5A3P25940 1745 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 LRP6O75581 1613 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PDCD6O75340 191 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PSMB8P28062 276 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM187Q14656 261 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PLXNB2O15031 1838 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 COL5A1P20908 1838 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 H3BVH4 76 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PPP1R3DO95685 299 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 CTLA4P16410 223 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 WT1P19544 449 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 CA6P23280 308 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM99Q8N816 258 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 CLEC7AQ9BXN2 247 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 STARD5Q9NSY2 213 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 LINC00527Q9UJ94 153 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 ADGRB1O14514 1584 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 E9PLD3 99 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 UBE2L6O14933 153 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 COX7CP15954 63 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FKBP2P26885 142 aaKnown RBP3.53□□□□□ -1.84
SCN3A-209ENST00000639244 HERVK_113P61574 105 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FOXF2Q12947 444 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FAM57BQ71RH2 274 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 HOGA1Q86XE5 327 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FMC1Q96HJ9 113 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 OARD1Q9Y530 152 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 A0A1W2PNR3 127 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 TM4SF5O14894 197 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 GYPBP06028 91 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 MPV17P39210 176 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FXYD4P59646 89 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 HBG2P69892 147 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 C15orf53Q8NAA6 179 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 FGF14Q92915 247 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 PAPPA2Q9BXP8 1791 aa3.53□□□□□ -1.84
SCN3A-209ENST00000639244 LRRC37A3O60309 1634 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 MS4A13Q5J8X5 152 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 SLC25A48Q6ZT89 311 aaKnown RBP3.53□□□□□ -1.85
SCN3A-209ENST00000639244 MMD2Q8IY49 270 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF784Q8NCA9 323 aaPredicted RBP3.53□□□□□ -1.85
SCN3A-209ENST00000639244 NT5CQ8TCD5 201 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 BADQ92934 168 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 BCL2L10Q9HD36 194 aa3.53□□□□□ -1.85
SCN3A-209ENST00000639244 DUOX1Q9NRD9 1551 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 MGAMO43451 1857 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 C2CD3Q4AC94 2353 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 A0A1W2PS18 150 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 C1QAP02745 245 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 MRPL2Q5T653 305 aaKnown RBP3.52□□□□□ -1.85
SCN3A-209ENST00000639244 ELSPBP1Q96BH3 223 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 TRAV12-2A0A075B6T6 113 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 MRPS36P82909 103 aaKnown RBP3.52□□□□□ -1.85
SCN3A-209ENST00000639244 IGFBP7Q16270 282 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF718Q3SXZ3 478 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 RPS4Y2Q8TD47 263 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SHANK2-AS3Q9BTD1 123 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 NXT2Q9NPJ8 142 aaKnown RBP3.52□□□□□ -1.85
SCN3A-209ENST00000639244 NHSL1Q5SYE7 1610 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 M0R1B8 84 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 PRRG2O14669 202 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 IGKCP01834 107 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 NUP35Q8NFH5 326 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 FAM57AQ8TBR7 257 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 SMIM14Q96QK8 99 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
SCN3A-209ENST00000639244 NHP2Q9NX24 153 aaKnown RBP3.52□□□□□ -1.85
SCN3A-209ENST00000639244 PGPA6NDG6 321 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms