RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SAP30O75446 220 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 OR2F1Q13607 317 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 CLINT1Q14677 625 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 ADAMTSL5Q6ZMM2 481 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 TNFSF18Q9UNG2 199 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 FOLR2P14207 255 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 EDN2P20800 178 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 INSL3P51460 131 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 OXLD1Q5BKU9 147 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 INO80EQ8NBZ0 244 aaPredicted RBP12.15□□□□□ -0.46
CLN6-216ENST00000636876 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 MARC2Q969Z3 335 aa12.15□□□□□ -0.46
CLN6-216ENST00000636876 TGP01266 2768 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 WI2-2373I1.2A0A1W2PRP0 233 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 RNF222A6NCQ9 220 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 IL4P05112 153 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 C8orf88P0DMB2 117 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 CBLN1P23435 193 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 SELENOTP62341 195 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 AKAP14Q86UN6 197 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 BPIFCQ8NFQ6 507 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 MGST2Q99735 147 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 ATP5SQ99766 215 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
CLN6-216ENST00000636876 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
CLN6-216ENST00000636876 G3V4G9 280 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 AGPAT2O15120 278 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 DFFBO76075 338 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
CLN6-216ENST00000636876 FGF7P21781 194 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
CLN6-216ENST00000636876 RAB31Q13636 194 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 USF2Q15853 346 aaPredicted RBP12.13□□□□□ -0.47
CLN6-216ENST00000636876 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
CLN6-216ENST00000636876 RNF125Q96EQ8 232 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 METTL26Q96S19 204 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 FBXL17Q9UF56 701 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
CLN6-216ENST00000636876 DNAH3Q8TD57 4116 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 IGHV7-4-1A0A0J9YVY3 117 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 MPDU1O75352 247 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 NPPCP23582 126 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 CAMLGP49069 296 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 LYZP61626 148 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 PBDC1Q9BVG4 233 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 SMPXQ9UHP9 88 aa12.12□□□□□ -0.47
CLN6-216ENST00000636876 IGHV3-49A0A0A0MS15 119 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 ARPC5O15511 151 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 IFNA5P01569 189 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 CRYBB3P26998 211 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
CLN6-216ENST00000636876 MFFQ9GZY8 342 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 TECRQ9NZ01 308 aaKnown RBP12.11□□□□□ -0.47
CLN6-216ENST00000636876 MLXQ9UH92 298 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 RABAC1Q9UI14 185 aa12.11□□□□□ -0.47
CLN6-216ENST00000636876 CHEK1O14757 476 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 APOHP02749 345 aaPredicted RBP12.1□□□□□ -0.47
CLN6-216ENST00000636876 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLN6-216ENST00000636876 LINC00869P0C866 280 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 AP2S1P53680 142 aaPredicted RBP12.1□□□□□ -0.47
CLN6-216ENST00000636876 OPCMLQ14982 345 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 RHPN1-AS1Q9BWJ2 59 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
CLN6-216ENST00000636876 U3KQE9 123 aa12.1□□□□□ -0.47
CLN6-216ENST00000636876 SORL1Q92673 2214 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 BMI1P35226 326 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 RPL29P47914 159 aaKnown RBP12.09□□□□□ -0.47
CLN6-216ENST00000636876 EIF2B2P49770 351 aaKnown RBP12.09□□□□□ -0.47
CLN6-216ENST00000636876 PLP1P60201 277 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 PRR20EP86478 221 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 PRR20CP86479 221 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 PRR20DP86480 221 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 PRR20BP86481 221 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 PRR20AP86496 221 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 NARS2Q96I59 477 aaKnown RBP12.09□□□□□ -0.47
CLN6-216ENST00000636876 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
CLN6-216ENST00000636876 A0A1W2PS18 150 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 C1QBP02746 253 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 ORM2P19652 201 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 CD300CQ08708 224 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 EGFEM1PQ0D2K5 195 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 ZNF266Q14584 549 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms