RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 NCOR1P1Q9H4R4 102 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 GPR183P32249 361 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 GTF2H5Q6ZYL4 71 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
CNOT3-210ENST00000618939 Q6AWC8 147 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 CRIP3Q6Q6R5 217 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 EEF1AKMT3Q96AZ1 226 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 IGHV1-3A0A0C4DH29 117 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 GZMBP10144 247 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 PSG1P11464 419 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 ATP5G2Q06055 141 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 COL25A1Q9BXS0 654 aaPredicted RBP11.32□□□□□ -0.6
CNOT3-210ENST00000618939 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 A0A1W2PS18 150 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 TRGV9Q99603 122 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 PRELID3AQ96N28 172 aa11.32□□□□□ -0.6
CNOT3-210ENST00000618939 PCNTO95613 3336 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 DNLZQ5SXM8 178 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 KLF2Q9Y5W3 355 aaPredicted RBP11.31□□□□□ -0.6
CNOT3-210ENST00000618939 PRR14LQ5THK1 2151 aa11.31□□□□□ -0.6
CNOT3-210ENST00000618939 A0A1B0GW15 77 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 CDKN1AP38936 164 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 IGFL3Q6UXB1 125 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 Q8TCH9 128 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 CD33P20138 364 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 FAM71F2Q6NXP2 309 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
CNOT3-210ENST00000618939 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ID1P41134 155 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 LY6EQ16553 131 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 SIGLEC9Q9Y336 463 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 TYMSP04818 313 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 C1orf194Q5T5A4 169 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF664Q8N3J9 261 aa11.3□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF207O43670 478 aaKnown RBP11.29□□□□□ -0.6
CNOT3-210ENST00000618939 TCRAP04437 139 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 DPF1Q92782 380 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
CNOT3-210ENST00000618939 A0A1W2PNU3 283 aaPredicted RBP11.29□□□□□ -0.6
CNOT3-210ENST00000618939 MMP23AO75900 390 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 CEACAM8P31997 349 aaPredicted RBP11.29□□□□□ -0.6
CNOT3-210ENST00000618939 PDLIM4P50479 330 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
CNOT3-210ENST00000618939 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
CNOT3-210ENST00000618939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.68e-7■■■□□ 14.8
CNOT3-210ENST00000618939 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 ST6GALNAC3Q8NDV1 305 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 THBDP07204 575 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 WT1P19544 449 aaPredicted RBP11.28□□□□□ -0.6
CNOT3-210ENST00000618939 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 PIMREGQ9BSJ6 248 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 E7EQL1 145 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 TFPI2P48307 235 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 PHLDA3Q9Y5J5 127 aa11.28□□□□□ -0.6
CNOT3-210ENST00000618939 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 BUB1B-PAK6H3BSN5 160 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 TRGV3P03979 118 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 LINC00614P0C842 121 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 ATP5J2P56134 94 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 Q6ZPA2 131 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 NIT1Q86X76 327 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 NUP35Q8NFH5 326 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 RNF5Q99942 180 aa11.27□□□□□ -0.6
CNOT3-210ENST00000618939 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 HERVK_113P61574 105 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms