RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CSN3P07498 182 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 EDN2P20800 178 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 FGF7P21781 194 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 RAB31Q13636 194 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 SLC45A2Q9UMX9 530 aa11.89□□□□□ -0.51
PCDHGC3-204ENST00000617222 C2orf70A6NJV1 201 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 A8MWP6 167 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 IFNA5P01569 189 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 C1QBP02746 253 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 IL4P05112 153 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGLL1P15814 213 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 CAMLGP49069 296 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 WDR61Q9GZS3 305 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 DAZ1Q9NQZ3 744 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-204ENST00000617222 WI2-2373I1.2A0A1W2PRP0 233 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 SAP30O75446 220 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 FOLR2P14207 255 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 LYZP61626 148 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 SELENOTP62341 195 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 ADAMTSL5Q6ZMM2 481 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 SCGB1C1Q8TD33 95 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 RNF125Q96EQ8 232 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 TRRAPQ9Y4A5 3859 aa11.87□□□□□ -0.51
PCDHGC3-204ENST00000617222 NOTCH3Q9UM47 2321 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 MPDU1O75352 247 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 CFDP00746 253 aaPredicted RBP11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 CXCL2P19875 107 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 CBLN1P23435 193 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 NPPCP23582 126 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 EIF2B2P49770 351 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 OPCMLQ14982 345 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 C9orf66Q5T8R8 295 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 HYLS1Q96M11 299 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 METTL26Q96S19 204 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 GGTLC1Q9BX51 225 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 NPCDR1Q9BY65 106 aa11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-204ENST00000617222 DNHD1Q96M86 4753 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 A0A0D9SG52 128 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGHV7-4-1A0A0J9YVY3 117 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 LINC00869P0C866 280 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 C8orf88P0DMB2 117 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 ORM2P19652 201 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 ZNF345Q14585 488 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 ZNF709Q8N972 641 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 MARC2Q969Z3 335 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 SIGLEC8Q9NYZ4 499 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 DOK5Q9P104 306 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 SMPXQ9UHP9 88 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 RABAC1Q9UI14 185 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
PCDHGC3-204ENST00000617222 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 PFDN1O60925 122 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 APOHP02749 345 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 CRYBB3P26998 211 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 ZNF266Q14584 549 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 ZFP69Q49AA0 526 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 DYNLRB2Q8TF09 96 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 PARD6GQ9BYG4 376 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 PXMP4Q9Y6I8 212 aa11.84□□□□□ -0.51
PCDHGC3-204ENST00000617222 VWFP04275 2813 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 CHEK1O14757 476 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 TAAR5O14804 337 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 HYPMO75409 117 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 OR5G3P0C626 314 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 INSL3P51460 131 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PLP1P60201 277 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 B2MP61769 119 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PRR20EP86478 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PRR20CP86479 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PRR20DP86480 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PRR20BP86481 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 PRR20AP86496 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 Q6ZRG5 221 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 TMUB2Q71RG4 321 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 ST8SIA2Q92186 375 aa11.83□□□□□ -0.52
PCDHGC3-204ENST00000617222 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms