RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNRD1Q9P1U0 126 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 SLC45A2Q9UMX9 530 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 HCFC1P51610 2035 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 PPIAL4EA0A075B759 164 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 FCN3O75636 299 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 RBP4P02753 201 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 PPIAL4FP0DN26 164 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 LGALS4P56470 323 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 GNG5P63218 68 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 UTF1Q5T230 341 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TCF24Q7RTU0 167 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 OR8B3Q8NGG8 313 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 RND1Q92730 232 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TMEM186Q96B77 213 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 SPTAN1Q13813 2472 aaKnown RBP8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 RBPJQ06330 500 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TEPPQ6URK8 271 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 CACNG8Q8WXS5 425 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 C11orf52Q96A22 123 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 FNDC4Q9H6D8 234 aaPredicted RBP8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 OR51B2Q9Y5P1 312 aa8.79□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 ZGRF1Q86YA3 2104 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 PYYP10082 97 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 NPY1RP25929 384 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 DUX4L9Q6RFH8 374 aaPredicted RBP8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 GFRALQ6UXV0 394 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 PDPNQ86YL7 162 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 FAM216BQ8N7L0 139 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 ZNF207O43670 478 aaKnown RBP8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 NIT1Q86X76 327 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 RNASE6Q93091 150 aaKnown RBP8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 ZNF714Q96N38 554 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 AP1S3Q96PC3 154 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 MEGF9Q9H1U4 602 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 ABCA4P78363 2273 aa8.78□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 OR4C46A6NHA9 309 aa8.77□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TMEM200BQ69YZ2 307 aa8.77□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 WFDC3Q8IUB2 231 aa8.77□□□□□ -1
SENP3-EIF4A1-201ENST00000614237 TEX50A0A1B0GTY4 177 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 H0YJW9 148 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 MMP23AO75900 390 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 YPEL3P61236 119 aaPredicted RBP8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 RHOBP62745 196 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 RAB31Q13636 194 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 TMEM167AQ8TBQ9 72 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 CHRDL1Q9BU40 450 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 ATMQ13315 3056 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 PIEZO2Q9H5I5 2752 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 B9A039 149 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 LINC00869P0C866 280 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 PRRX1P54821 245 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 MSRB2Q9Y3D2 182 aa8.77□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 PRB3Q04118 309 aaPredicted RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 VSTM2AQ8TAG5 236 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 SNRNP40Q96DI7 357 aaKnown RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 SAP30LQ9HAJ7 183 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 V9GYV3 84 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 TRAV9-1A0A075B6T8 112 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 MT-CO2P00403 227 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 REG1BP48304 166 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 UCNP55089 124 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 UBE2L3P68036 154 aaKnown RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 TMEM136Q6ZRR5 245 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 SPATA12Q7Z6I5 190 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 OR9G1Q8NH87 305 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 C8orf46Q8TAG6 207 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 LAMA5O15230 3695 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 C9JCJ5 164 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 J3QR06 171 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 UBE2G1P62253 170 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 RPL24P83731 157 aaKnown RBP8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 LRRC10Q5BKY1 277 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 Q8N976 141 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 MC5RP33032 325 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 BSNQ9UPA5 3926 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 E7EQL1 145 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 NDUFB3O43676 98 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 IGLV2-23P01705 113 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 OR4C13Q8NGP0 309 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 NABP2Q9BQ15 211 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 LOXP28300 417 aaPredicted RBP8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 MORN5Q5VZ52 161 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 TMEM190Q8WZ59 177 aa8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 F11RQ9Y624 299 aaKnown RBP8.75□□□□□ -1.01
SENP3-EIF4A1-201ENST00000614237 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms