RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 SFT2D2O95562 160 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 OR4E1P0C645 316 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 SLC25A6P12236 298 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 VAMP1P23763 118 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 RPL11P62913 178 aaKnown RBP9.48□□□□□ -0.89
SNX20-205ENST00000610485 LYG2Q86SG7 212 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 OR1S1Q8NH92 325 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 ACY3Q96HD9 319 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 SEC22CQ9BRL7 303 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 TENM2Q9NT68 2774 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
SNX20-205ENST00000610485 C7orf66A4D0T2 115 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 MPTX1A8MV57 137 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 K7EQG2 157 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 TOMM40O96008 361 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX20-205ENST00000610485 ATF4P18848 351 aaPredicted RBP9.47□□□□□ -0.89
SNX20-205ENST00000610485 DEFB131AP59861 70 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
SNX20-205ENST00000610485 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX20-205ENST00000610485 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 USF2Q15853 346 aaPredicted RBP9.47□□□□□ -0.89
SNX20-205ENST00000610485 C16orf54Q6UWD8 224 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 GLMPQ8WWB7 406 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 MED28Q9H204 178 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 RABAC1Q9UI14 185 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 TMED3Q9Y3Q3 217 aa9.47□□□□□ -0.89
SNX20-205ENST00000610485 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
SNX20-205ENST00000610485 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 SSNA1O43805 119 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 PFDN1O60925 122 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 IFNA4P05014 189 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 IL4P05112 153 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 RD3LP0DJH9 198 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 GPX4P36969 197 aaPredicted RBP9.46□□□□□ -0.9
SNX20-205ENST00000610485 LEMD1Q68G75 181 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 ZNF431Q8TF32 576 aaPredicted RBP9.46□□□□□ -0.9
SNX20-205ENST00000610485 DCANP1Q8TF63 244 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
SNX20-205ENST00000610485 HELTA6NFD8 242 aa9.45□□□□□ -0.9
SNX20-205ENST00000610485 JTBO76095 146 aa9.45□□□□□ -0.9
SNX20-205ENST00000610485 PSG1P11464 419 aa9.45□□□□□ -0.9
SNX20-205ENST00000610485 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
SNX20-205ENST00000610485 RRAS2P62070 204 aaPredicted RBP9.45□□□□□ -0.9
SNX20-205ENST00000610485 GAMTQ14353 236 aa9.45□□□□□ -0.9
SNX20-205ENST00000610485 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
SNX20-205ENST00000610485 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 C9orf170A2RU37 121 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 BUB3O43684 328 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
SNX20-205ENST00000610485 IAPPP10997 89 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 AP2S1P53680 142 aaPredicted RBP9.44□□□□□ -0.9
SNX20-205ENST00000610485 DHRS2Q13268 280 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
SNX20-205ENST00000610485 C12orf45Q8N5I9 185 aaPredicted RBP9.44□□□□□ -0.9
SNX20-205ENST00000610485 TMEM217Q8N7C4 229 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 OR51G1Q8NGK1 321 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 SLC35E1Q96K37 410 aa9.44□□□□□ -0.9
SNX20-205ENST00000610485 MED6O75586 246 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 HOXB5P09067 269 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 ZNF688P0C7X2 276 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 RAB11AP62491 216 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 FCN2Q15485 313 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 GGNBP1Q5YKI7 109 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 STHQ8IWL8 128 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
SNX20-205ENST00000610485 RARRES2Q99969 163 aa9.43□□□□□ -0.9
SNX20-205ENST00000610485 CXorf65A6NEN9 183 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 ZFP92A6NM28 416 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 SYNGR2O43760 224 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 CCNKO75909 580 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 NUP62P37198 522 aaPredicted RBP9.42□□□□□ -0.9
SNX20-205ENST00000610485 ZNF90Q03938 601 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 MITD1Q8WV92 249 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 MAGT1Q9H0U3 335 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
SNX20-205ENST00000610485 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
SNX20-205ENST00000610485 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
SNX20-205ENST00000610485 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 ADAP1O75689 374 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 FABP1P07148 127 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
SNX20-205ENST00000610485 SPP1P10451 314 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
SNX20-205ENST00000610485 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
SNX20-205ENST00000610485 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
SNX20-205ENST00000610485 THAP8Q8NA92 274 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms