RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	PRSS54	Q6PEW0	395 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	TOMM20L	Q6UXN7	152 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	STPG3	Q8N7X2	389 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	TMEM170A	Q8WVE7	144 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	ACY3	Q96HD9	319 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	OR10C1	Q96KK4	312 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	SMPX	Q9UHP9	88 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	TBC1D24	Q9ULP9	559 aa		13.58	□□□□□ -0.24
LTBP4-231	ENST00000602251	KIR2DL5B	A0A0G2JN68	375 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	KIR2DL5B	A0A0G2JPC4	375 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGHV7-4-1	A0A0J9YVY3	117 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	OR10J1	P30954	320 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	NKX2-1	P43699	371 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	NANOS2	P60321	138 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	IAH1	Q2TAA2	248 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	TIGIT	Q495A1	244 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	KIR2DL5A	Q8N109	375 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	OR1S2	Q8NGQ3	325 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	KIR2DL5B	Q8NHK3	375 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	NPIPB3	Q92617	1050 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	SLC35E1	Q96K37	410 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	RHPN1-AS1	Q9BWJ2	59 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	GSKIP	Q9P0R6	139 aa		13.57	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGHV3-49	A0A0A0MS15	119 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	MPTX1	A8MV57	137 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	SCGB1D2	O95969	90 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	TCTA	P57738	103 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	DEFA1	P59665	94 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	DEFA3	P59666	94 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	ZNF431	Q8TF32	576 aa	Predicted RBP	13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251		Q8WTZ3	238 aa		13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	NARS2	Q96I59	477 aa	Known RBP	13.56	□□□□□ -0.24
LTBP4-231	ENST00000602251	FAM25E	A8MYX2	175 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	NPPC	P23582	126 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	GPX4	P36969	197 aa	Predicted RBP	13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	ID3	Q02535	119 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	SPANXN5	Q5MJ07	72 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	C2CD4C	Q8TF44	421 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	METTL26	Q96S19	204 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	SPAG8	Q99932	426 aa	Predicted RBP	13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	SEC22C	Q9BRL7	303 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	FBXL17	Q9UF56	701 aa		13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	STRAP	Q9Y3F4	350 aa	Known RBP	13.55	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGHV3OR16-13	A0A075B7E8	117 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGHV3-74	A0A0B4J1X5	117 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	CHEK1	O14757	476 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	TSPAN4	O14817	238 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGKV1-17	P01599	117 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	IGLC1	P0CG04	106 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	YPEL3	P61236	119 aa	Predicted RBP	13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	POLR2G	P62487	172 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	OR4D5	Q8NGN0	318 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	C11orf45	Q8TAV5	145 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	MFF	Q9GZY8	342 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	TMEM231	Q9H6L2	316 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	ZFAND3	Q9H8U3	227 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251	UBQLN2	Q9UHD9	624 aa		13.54	□□□□□ -0.24
LTBP4-231	ENST00000602251		A0A1W2PS18	150 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	C5orf51	A6NDU8	294 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	ZFP92	A6NM28	416 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	SSSCA1	O60232	199 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	CD5	P06127	495 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	ZNF414	Q96IQ9	312 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	RNF2	Q99496	336 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	GPN1	Q9HCN4	374 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	PSENEN	Q9NZ42	101 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	APLN	Q9ULZ1	77 aa		13.53	□□□□□ -0.24
LTBP4-231	ENST00000602251	OR4C46	A6NHA9	309 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251		H3BP45	60 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	CCS	O14618	274 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	FABP1	P07148	127 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	RD3L	P0DJH9	198 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	RPL35A	P18077	110 aa	Known RBP	13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	RPL11	P62913	178 aa	Known RBP	13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	IFITM3	Q01628	133 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	GAMT	Q14353	236 aa		13.52	□□□□□ -0.25
LTBP4-231	ENST00000602251	IGKV3-7	A0A075B6H7	116 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	IGHV3-66	A0A0C4DH42	116 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	PAFAH1B2	P68402	229 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	ST8SIA2	Q92186	375 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	GRAMD2B	Q96HH9	432 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	RAB40C	Q96S21	281 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	MAP6D1	Q9H9H5	199 aa		13.51	□□□□□ -0.25
LTBP4-231	ENST00000602251	TOMM40	O96008	361 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	IL4	P05112	153 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	IL5	P05113	134 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	ODF3L2	Q3SX64	289 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	GSG1L	Q6UXU4	331 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	TCF24	Q7RTU0	167 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	NRARP	Q7Z6K4	114 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	SMIM8	Q96KF7	97 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	RARRES2	Q99969	163 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	VSIR	Q9H7M9	311 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	HSPG2	P98160	4391 aa		13.5	□□□□□ -0.25
LTBP4-231	ENST00000602251	IGLL5	B9A064	214 aa		13.49	□□□□□ -0.25
LTBP4-231	ENST00000602251		L7N2F9	121 aa		13.49	□□□□□ -0.25
LTBP4-231	ENST00000602251	DNASE2	O00115	360 aa	Predicted RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms