RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 IGKV1D-37A0A075B6S9 117 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 FAM90A26D6RGX4 464 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 SFT2D2O95562 160 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 DHRS2Q13268 280 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 PPP1R1AQ13522 171 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 TMED3Q9Y3Q3 217 aa16.52■□□□□ 0.24
SSBP4-209ENST00000601357 BIRC6Q9NR09 4857 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 KNCNA6PVL3 124 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 SPP1P10451 314 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 SPANXN2Q5MJ10 180 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 MORN3Q6PF18 240 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-209ENST00000601357 OR51G1Q8NGK1 321 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 RNF125Q96EQ8 232 aa16.51■□□□□ 0.23
SSBP4-209ENST00000601357 TMEM41BQ5BJD5 291 aa16.5■□□□□ 0.23
SSBP4-209ENST00000601357 CENPSQ8N2Z9 138 aa16.5■□□□□ 0.23
SSBP4-209ENST00000601357 PHLDA1Q8WV24 401 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-209ENST00000601357 SEPSECSQ9HD40 501 aaKnown RBP16.5■□□□□ 0.23
SSBP4-209ENST00000601357 NRN1Q9NPD7 142 aa16.5■□□□□ 0.23
SSBP4-209ENST00000601357 KLK5Q9Y337 293 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-209ENST00000601357 IAPPP10997 89 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 C4BPBP20851 252 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 ZNF90Q03938 601 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 ACTL10Q5JWF8 245 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 OR8G2PQ6IF36 304 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 SIGLEC15Q6ZMC9 328 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 SLC35E1Q96K37 410 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 RAB40CQ96S21 281 aa16.49■□□□□ 0.23
SSBP4-209ENST00000601357 ZFP92A6NM28 416 aa16.48■□□□□ 0.23
SSBP4-209ENST00000601357 UBE2MP61081 183 aaKnown RBP16.48■□□□□ 0.23
SSBP4-209ENST00000601357 BAK1Q16611 211 aa16.48■□□□□ 0.23
SSBP4-209ENST00000601357 PSMG4Q5JS54 123 aa16.48■□□□□ 0.23
SSBP4-209ENST00000601357 Q8NAQ8 132 aa16.48■□□□□ 0.23
SSBP4-209ENST00000601357 IGKV1OR2-108A0A075B7D4 117 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 PRSS46E5RG02 174 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 MED6O75586 246 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 NUP62P37198 522 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-209ENST00000601357 RAB11AP62491 216 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 C11orf45Q8TAV5 145 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 MFFQ9GZY8 342 aa16.47■□□□□ 0.23
SSBP4-209ENST00000601357 DEFB4AO15263 64 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 SYNGR2O43760 224 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 NDUFB6O95139 128 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 NANOS2P60321 138 aaKnown RBP16.46■□□□□ 0.23
SSBP4-209ENST00000601357 SNRPD3P62318 126 aaKnown RBP16.46■□□□□ 0.23
SSBP4-209ENST00000601357 GGNBP1Q5YKI7 109 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 THAP8Q8NA92 274 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 CSNK1G2-AS1Q8NCQ2 148 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 CIB3Q96Q77 187 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-209ENST00000601357 TRGV9Q99603 122 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 PBDC1Q9BVG4 233 aa16.46■□□□□ 0.23
SSBP4-209ENST00000601357 ZNF705EA8MWA4 302 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-209ENST00000601357 LY6G6CO95867 125 aa16.45■□□□□ 0.22
SSBP4-209ENST00000601357 HOXB5P09067 269 aa16.45■□□□□ 0.22
SSBP4-209ENST00000601357 SDHCQ99643 169 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-209ENST00000601357 MAGT1Q9H0U3 335 aa16.45■□□□□ 0.22
SSBP4-209ENST00000601357 C9orf170A2RU37 121 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 NAP1L6A6NFF2 107 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 FABP1P07148 127 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 C1orf194Q5T5A4 169 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 PFDN2Q9UHV9 154 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 X6R8D5 127 aa16.44■□□□□ 0.22
SSBP4-209ENST00000601357 SNRPGP15A8MWD9 76 aa16.43■□□□□ 0.22
SSBP4-209ENST00000601357 RBMY1A1P0DJD3 496 aaKnown RBP16.43■□□□□ 0.22
SSBP4-209ENST00000601357 RBMY1CP0DJD4 496 aa16.43■□□□□ 0.22
SSBP4-209ENST00000601357 RBMY1FQ15415 496 aaKnown RBP16.43■□□□□ 0.22
SSBP4-209ENST00000601357 HRH4Q9H3N8 390 aa16.43■□□□□ 0.22
SSBP4-209ENST00000601357 KMT2AQ03164 3969 aa16.43■□□□□ 0.22
SSBP4-209ENST00000601357 IGHV4-28A0A0C4DH34 117 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 H3BMM0 161 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 WRBO00258 174 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 ADAP1O75689 374 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 MIFP14174 115 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 BTCP35070 178 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 NKX2-1P43699 371 aaPredicted RBP16.42■□□□□ 0.22
SSBP4-209ENST00000601357 LYZP61626 148 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 RPP30P78346 268 aaKnown RBP16.42■□□□□ 0.22
SSBP4-209ENST00000601357 ID3Q02535 119 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 TRIQKQ629K1 86 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 FBXL17Q9UF56 701 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 FLVCR2Q9UPI3 526 aa16.42■□□□□ 0.22
SSBP4-209ENST00000601357 INPP1P49441 399 aa16.41■□□□□ 0.22
SSBP4-209ENST00000601357 OR2F1Q13607 317 aa16.41■□□□□ 0.22
SSBP4-209ENST00000601357 WDR12Q9GZL7 423 aaKnown RBP16.41■□□□□ 0.22
SSBP4-209ENST00000601357 CLEC5AQ9NY25 188 aa16.41■□□□□ 0.22
SSBP4-209ENST00000601357 PAIP2BQ9ULR5 123 aaKnown RBP16.41■□□□□ 0.22
SSBP4-209ENST00000601357 SOCS3O14543 225 aa16.4■□□□□ 0.22
SSBP4-209ENST00000601357 HLA-DRB4P13762 266 aa16.4■□□□□ 0.22
SSBP4-209ENST00000601357 HLA-DRB4X5D2U9 266 aa16.4■□□□□ 0.22
SSBP4-209ENST00000601357 CFDP00746 253 aaPredicted RBP16.39■□□□□ 0.21
SSBP4-209ENST00000601357 OR4E1P0C645 316 aa16.39■□□□□ 0.21
SSBP4-209ENST00000601357 NUTF2P61970 127 aaKnown RBP16.39■□□□□ 0.21
SSBP4-209ENST00000601357 SPANXN5Q5MJ07 72 aa16.39■□□□□ 0.21
SSBP4-209ENST00000601357 TBC1D24Q9ULP9 559 aa16.39■□□□□ 0.21
SSBP4-209ENST00000601357 H3BP45 60 aa16.38■□□□□ 0.21
SSBP4-209ENST00000601357 PSMB3P49720 205 aa16.38■□□□□ 0.21
SSBP4-209ENST00000601357 OR4D5Q8NGN0 318 aa16.38■□□□□ 0.21
SSBP4-209ENST00000601357 COQ8AQ8NI60 647 aa16.38■□□□□ 0.21
SSBP4-209ENST00000601357 C1QTNF4Q9BXJ3 329 aa16.38■□□□□ 0.21
SSBP4-209ENST00000601357 STRAPQ9Y3F4 350 aaKnown RBP16.38■□□□□ 0.21
SSBP4-209ENST00000601357 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms