RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PSG5Q15238 335 aa9.31□□□□□ -0.92
VRK3-223ENST00000601341 TEX38Q6PEX7 206 aa9.31□□□□□ -0.92
VRK3-223ENST00000601341 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
VRK3-223ENST00000601341 ELOVL1Q9BW60 279 aa9.31□□□□□ -0.92
VRK3-223ENST00000601341 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
VRK3-223ENST00000601341 ITPR3Q14573 2671 aa9.31□□□□□ -0.92
VRK3-223ENST00000601341 SVEP1Q4LDE5 3571 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 GATCO43716 136 aaKnown RBP9.3□□□□□ -0.92
VRK3-223ENST00000601341 FABP4P15090 132 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 CD24P25063 80 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
VRK3-223ENST00000601341 EBI3Q14213 229 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 GAMTQ14353 236 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
VRK3-223ENST00000601341 FAM78BQ5VT40 261 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 GFI1BQ5VTD9 330 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 LURAP1LQ8IV03 231 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 OR10G8Q8NGN5 311 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 DERL1Q9BUN8 251 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 MEGF9Q9H1U4 602 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 CR1P17927 2039 aa9.3□□□□□ -0.92
VRK3-223ENST00000601341 FLNBO75369 2602 aaKnown RBP9.3□□□□□ -0.92
VRK3-223ENST00000601341 A0A0U1RQK1 487 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 GCGP01275 180 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
VRK3-223ENST00000601341 SELENOTP62341 195 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 MMDQ15546 238 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 TRBV9A0A0B4J1U6 114 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 NBR2O15453 112 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 CRYGBP07316 175 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 TMEM11P17152 192 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 CNTFRP26992 372 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 COX19Q49B96 90 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 TEX29Q8N6K0 151 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 NPBQ8NG41 125 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 SGMS2Q8NHU3 365 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 HINT2Q9BX68 163 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 PRDM13Q9H4Q3 707 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 SIGLEC9Q9Y336 463 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 ABCA1O95477 2261 aa9.29□□□□□ -0.92
VRK3-223ENST00000601341 ZANQ9Y493 2812 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 IGKV1OR2-108A0A075B7D4 117 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 ACTL6BO94805 426 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 AMBPP02760 352 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 C8orf88P0DMB2 117 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 PLGLAQ15195 96 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 PRSS8Q16651 343 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 PPP1R27Q86WC6 154 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 Q8N6K4 173 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 ZNF114Q8NC26 417 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 TMEM190Q8WZ59 177 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
VRK3-223ENST00000601341 ZNF430Q9H8G1 570 aaPredicted RBP9.28□□□□□ -0.92
VRK3-223ENST00000601341 PSMB11A5LHX3 300 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 NDUFA3O95167 84 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 FSHBP01225 129 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 OR10J1P30954 320 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 PKIAP61925 76 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 FAM120AOSQ5T036 256 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 ETFRF1Q6IPR1 90 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 THAP8Q8NA92 274 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 FBXL15Q9H469 300 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 C1RLQ9NZP8 487 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.92
VRK3-223ENST00000601341 ZNF320A2RRD8 509 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 HELTA6NFD8 242 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
VRK3-223ENST00000601341 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 COMPP49747 757 aaPredicted RBP9.27□□□□□ -0.93
VRK3-223ENST00000601341 SPATA31B1PQ5VZV4 182 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
VRK3-223ENST00000601341 CSPG4Q6UVK1 2322 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 FLNAP21333 2647 aaKnown RBP9.26□□□□□ -0.93
VRK3-223ENST00000601341 CD5LO43866 347 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 MYOD1P15172 320 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 GNG4P50150 75 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 TAS2R60P59551 318 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 C5orf64Q2M2E5 130 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 MRGPRG-AS1Q2M3A8 158 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 PDZD11Q5EBL8 140 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 C9orf139Q6ZV77 190 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 TMEM37Q8WXS4 190 aa9.26□□□□□ -0.93
VRK3-223ENST00000601341 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
VRK3-223ENST00000601341 TNCP24821 2201 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 MYO9AB2RTY4 2548 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 K7EN84 100 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms