RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZNF600	Q6ZNG1	722 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	CYP2G1P	Q6ZSU1	146 aa		16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	ZNF471	Q9BX82	626 aa	Predicted RBP	16.84	■□□□□ 0.29
LTBP4-227	ENST00000600026	AGPAT2	O15120	278 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	VWF	P04275	2813 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	ZP3	P21754	424 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	HOXD3	P31249	432 aa	Predicted RBP	16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	OPCML	Q14982	345 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	RPEL1	Q2QD12	228 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026		Q8WTZ3	238 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	MGST2	Q99735	147 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	CYTL1	Q9NRR1	136 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	KCNIP2	Q9NS61	270 aa		16.83	■□□□□ 0.28
LTBP4-227	ENST00000600026	TOMM40	O96008	361 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	RD3L	P0DJH9	198 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	CD33	P20138	364 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	ZNF90	Q03938	601 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	HSD17B11	Q8NBQ5	300 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	BPIFC	Q8NFQ6	507 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	NPCDR1	Q9BY65	106 aa		16.82	■□□□□ 0.28
LTBP4-227	ENST00000600026	OR2C1	O95371	312 aa		16.81	■□□□□ 0.28
LTBP4-227	ENST00000600026	CFD	P00746	253 aa	Predicted RBP	16.81	■□□□□ 0.28
LTBP4-227	ENST00000600026	FAM106A	Q4KMX7	169 aa		16.81	■□□□□ 0.28
LTBP4-227	ENST00000600026	WFDC9	Q8NEX5	89 aa		16.81	■□□□□ 0.28
LTBP4-227	ENST00000600026	DLX4	Q92988	240 aa	Predicted RBP	16.81	■□□□□ 0.28
LTBP4-227	ENST00000600026	PSG1	P11464	419 aa		16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	SLC51B	Q86UW2	128 aa		16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	OR51G1	Q8NGK1	321 aa		16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	GNPNAT1	Q96EK6	184 aa	Predicted RBP	16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	GGTLC1	Q9BX51	225 aa		16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	SLC45A2	Q9UMX9	530 aa		16.8	■□□□□ 0.28
LTBP4-227	ENST00000600026	IGHV3-35	A0A0C4DH35	117 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	NDUFA4	O00483	81 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	YIF1A	O95070	293 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	TPT1	P13693	172 aa	Known RBP	16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	RPL29	P47914	159 aa	Known RBP	16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	GPHB5	Q86YW7	130 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	RSG1	Q9BU20	258 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	TIMM9	Q9Y5J7	89 aa		16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	PUS1	Q9Y606	427 aa	Known RBP eCLIP	16.79	■□□□□ 0.28
LTBP4-227	ENST00000600026	MEGF8	Q7Z7M0	2845 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	OVOL1	O14753	267 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	ATP6V0C	P27449	155 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	MIC13	Q5XKP0	118 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	GINS3	Q9BRX5	216 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	PXMP4	Q9Y6I8	212 aa		16.78	■□□□□ 0.28
LTBP4-227	ENST00000600026	LINC00869	P0C866	280 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	GATA2	P23769	480 aa	Predicted RBP	16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	KLF5	Q13887	457 aa	Predicted RBP	16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	TOMM20L	Q6UXN7	152 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026		Q6ZRG5	221 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	BAP18	Q8IXM2	172 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	STPG3	Q8N7X2	389 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	STOML3	Q8TAV4	291 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	PSMG3	Q9BT73	122 aa	Predicted RBP	16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	ARV1	Q9H2C2	271 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	BOLA1	Q9Y3E2	137 aa		16.77	■□□□□ 0.28
LTBP4-227	ENST00000600026	IL4	P05112	153 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	IGLL1	P15814	213 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	SYNJ2BP	P57105	145 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	LYZ	P61626	148 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	B2M	P61769	119 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	PXDC1	Q5TGL8	231 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	TMEM182	Q6ZP80	229 aa	Predicted RBP	16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	C1QL4	Q86Z23	238 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	RCC1L	Q96I51	464 aa	Known RBP	16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	SLC39A9	Q9NUM3	307 aa		16.76	■□□□□ 0.27
LTBP4-227	ENST00000600026	WI2-2373I1.2	A0A1W2PRP0	233 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	ZNF320	A2RRD8	509 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PRR20E	P86478	221 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PRR20C	P86479	221 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PRR20D	P86480	221 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PRR20B	P86481	221 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PRR20A	P86496	221 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	TMEM190	Q8WZ59	177 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	RNF125	Q96EQ8	232 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	C20orf24	Q9BUV8	137 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	PBDC1	Q9BVG4	233 aa		16.75	■□□□□ 0.27
LTBP4-227	ENST00000600026	LGALS9	O00182	355 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	SERF2	P84101	59 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	FFAR4	Q5NUL3	377 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	REC114	Q7Z4M0	266 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	ST8SIA2	Q92186	375 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	MCRIP2	Q9BUT9	160 aa	Known RBP	16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	SLC25A32	Q9H2D1	315 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	ZFAND3	Q9H8U3	227 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	UFC1	Q9Y3C8	167 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	PKD1L1	Q8TDX9	2849 aa		16.74	■□□□□ 0.27
LTBP4-227	ENST00000600026	ORM2	P19652	201 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	PLP1	P60201	277 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	EIF5AL1	Q6IS14	154 aa	Known RBP	16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	S100A7A	Q86SG5	101 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	OR1L4	Q8NGR5	311 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	OR1B1	Q8NGR6	318 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	OR2G3	Q8NGZ4	309 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	ZNF414	Q96IQ9	312 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	SH3BGRL3	Q9H299	93 aa		16.73	■□□□□ 0.27
LTBP4-227	ENST00000600026	SEC14L6	B5MCN3	397 aa		16.72	■□□□□ 0.27
LTBP4-227	ENST00000600026	COX7A2P2	O60397	106 aa		16.72	■□□□□ 0.27
LTBP4-227	ENST00000600026	HYPM	O75409	117 aa		16.72	■□□□□ 0.27

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms