RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SLC25A21Q9BQT8 299 aaPredicted RBP12.33□□□□□ -0.44
PNKP-210ENST00000597965 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
PNKP-210ENST00000597965 IGKV1-5P01602 117 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 P0C879 139 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 P0DMU3 169 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 HTR2BP41595 481 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 DHRS2Q13268 280 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 Q8WTZ3 238 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 PRRT1Q99946 306 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 SEPSECSQ9HD40 501 aaKnown RBP12.32□□□□□ -0.44
PNKP-210ENST00000597965 CACFD1Q9UGQ2 172 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 VPS13DQ5THJ4 4388 aa12.32□□□□□ -0.44
PNKP-210ENST00000597965 HECTD4Q9Y4D8 3996 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 AMBPP02760 352 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 SLC25A4P12235 298 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
PNKP-210ENST00000597965 SPCS3P61009 180 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 ETFRF1Q6IPR1 90 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 OR1S2Q8NGQ3 325 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 X6R8D5 127 aa12.31□□□□□ -0.44
PNKP-210ENST00000597965 AGRNO00468 2067 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 KNCNA6PVL3 124 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 SNRPGP15A8MWD9 76 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 C4BPBP20851 252 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 FCN2Q15485 313 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 BSXQ3C1V8 233 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 NOXA1Q86UR1 476 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 LHFPL1Q86WI0 220 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 OR52E5Q8NH55 327 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 RAB40CQ96S21 281 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 SEC22CQ9BRL7 303 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 NDUFAF3Q9BU61 184 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 MED28Q9H204 178 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 FNDC4Q9H6D8 234 aaPredicted RBP12.3□□□□□ -0.44
PNKP-210ENST00000597965 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
PNKP-210ENST00000597965 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
PNKP-210ENST00000597965 IGKV1-17P01599 117 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 YPEL3P61236 119 aaPredicted RBP12.29□□□□□ -0.44
PNKP-210ENST00000597965 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 POM121L12Q8N7R1 296 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 TERB2Q8NHR7 220 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
PNKP-210ENST00000597965 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.29□□□□□ -0.44
PNKP-210ENST00000597965 HERC2O95714 4834 aa12.29□□□□□ -0.44
PNKP-210ENST00000597965 PI3P19957 117 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 UCP1P25874 307 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
PNKP-210ENST00000597965 TIGITQ495A1 244 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 C16orf54Q6UWD8 224 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
PNKP-210ENST00000597965 HEYLQ9NQ87 328 aaPredicted RBP12.28□□□□□ -0.44
PNKP-210ENST00000597965 CLEC5AQ9NY25 188 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 U3KQE9 123 aa12.28□□□□□ -0.44
PNKP-210ENST00000597965 TMEM189A5PLL7 270 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 IGLC1P0CG04 106 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 MED14OSP0DP75 135 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 OR10J1P30954 320 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 C2orf83Q53S99 150 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 TCTE3Q8IZS6 198 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 GLMPQ8WWB7 406 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 NRN1Q9NPD7 142 aa12.27□□□□□ -0.45
PNKP-210ENST00000597965 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
PNKP-210ENST00000597965 MLANAQ16655 118 aa12.26□□□□□ -0.45
PNKP-210ENST00000597965 C12orf74Q32Q52 190 aa12.26□□□□□ -0.45
PNKP-210ENST00000597965 FAM210BQ96KR6 192 aa12.26□□□□□ -0.45
PNKP-210ENST00000597965 MRPL36Q9P0J6 103 aaKnown RBP12.26□□□□□ -0.45
PNKP-210ENST00000597965 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
PNKP-210ENST00000597965 C14orf166Q9Y224 244 aaKnown RBP12.26□□□□□ -0.45
PNKP-210ENST00000597965 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 FAM90A26D6RGX4 464 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 SSNA1O43805 119 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 CDS2O95674 445 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 OR4E1P0C645 316 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 SPART-AS1P0CW21 52 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 RND2P52198 227 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 SP6Q3SY56 376 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 SLC24A4Q8NFF2 622 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 ZNF431Q8TF32 576 aaPredicted RBP12.25□□□□□ -0.45
PNKP-210ENST00000597965 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
PNKP-210ENST00000597965 NEU1Q99519 415 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 TMEM222Q9H0R3 208 aa12.25□□□□□ -0.45
PNKP-210ENST00000597965 IFNA21P01568 189 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 IL4P05112 153 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 CXCL3P19876 107 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms