RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 IGHV3-74A0A0B4J1X5 117 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 DNASE2O00115 360 aaPredicted RBP11.17□□□□□ -0.62
LIG1-214ENST00000597146 NPPCP23582 126 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 TOMM20LQ6UXN7 152 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 SLC24A4Q8NFF2 622 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 TMEM231Q9H6L2 316 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
LIG1-214ENST00000597146 PUS1Q9Y606 427 aaKnown RBP eCLIP11.17□□□□□ -0.62
LIG1-214ENST00000597146 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
LIG1-214ENST00000597146 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 A0A1B0GU03 582 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 NAP1L6A6NFF2 107 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 CHEK1O14757 476 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 CLN5O75503 358 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 CD5P06127 495 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 TNP2Q05952 138 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 ZNF79Q15937 498 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 CENPSQ8N2Z9 138 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 RNASEH2CQ8TDP1 164 aaKnown RBP11.16□□□□□ -0.62
LIG1-214ENST00000597146 Q8WTZ3 238 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
LIG1-214ENST00000597146 PAIP2BQ9ULR5 123 aaKnown RBP11.16□□□□□ -0.62
LIG1-214ENST00000597146 A0A1W2PS18 150 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 SLC25A4P12235 298 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 NPY1RP25929 384 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 UBE2DNLQ8IWF7 75 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 METTL26Q96S19 204 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 RNF2Q99496 336 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 RBKSQ9H477 322 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 U3KQ87 197 aa11.15□□□□□ -0.62
LIG1-214ENST00000597146 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 MED6O75586 246 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 SUPT4H1P63272 117 aaKnown RBP11.14□□□□□ -0.63
LIG1-214ENST00000597146 TIGITQ495A1 244 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 GRAMD2BQ96HH9 432 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 OR10C1Q96KK4 312 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 SRRQ9GZT4 340 aa11.14□□□□□ -0.63
LIG1-214ENST00000597146 SFT2D2O95562 160 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 HOXB5P09067 269 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 RND2P52198 227 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 RAB11AP62491 216 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
LIG1-214ENST00000597146 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 NMSQ5H8A3 153 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 OR1S2Q8NGQ3 325 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
LIG1-214ENST00000597146 FAT1Q14517 4588 aa11.13□□□□□ -0.63
LIG1-214ENST00000597146 IFNA21P01568 189 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 MIFP14174 115 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 OR10J1P30954 320 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 EIF2B2P49770 351 aaKnown RBP11.12□□□□□ -0.63
LIG1-214ENST00000597146 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
LIG1-214ENST00000597146 PPP1R1AQ13522 171 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 BAK1Q16611 211 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 TMED3Q9Y3Q3 217 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 X6R8D5 127 aa11.12□□□□□ -0.63
LIG1-214ENST00000597146 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
LIG1-214ENST00000597146 RD3LP0DJH9 198 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 C4orf46Q504U0 113 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 ST8SIA2Q92186 375 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 SLC35E1Q96K37 410 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
LIG1-214ENST00000597146 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
LIG1-214ENST00000597146 DFFBO76075 338 aa11.1□□□□□ -0.63
LIG1-214ENST00000597146 FABP1P07148 127 aa11.1□□□□□ -0.63
LIG1-214ENST00000597146 IAPPP10997 89 aa11.1□□□□□ -0.63
LIG1-214ENST00000597146 UBE2MP61081 183 aaKnown RBP11.1□□□□□ -0.63
LIG1-214ENST00000597146 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
LIG1-214ENST00000597146 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
LIG1-214ENST00000597146 SRRM2Q9UQ35 2752 aaKnown RBP11.09□□□□□ -0.63
LIG1-214ENST00000597146 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 ZNF705EA8MWA4 302 aaPredicted RBP11.09□□□□□ -0.63
LIG1-214ENST00000597146 WRBO00258 174 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 NDUFB6O95139 128 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 APOHP02749 345 aaPredicted RBP11.09□□□□□ -0.63
LIG1-214ENST00000597146 SLC25A6P12236 298 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 C4BPBP20851 252 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
LIG1-214ENST00000597146 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
LIG1-214ENST00000597146 CNPY1Q3B7I2 92 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
LIG1-214ENST00000597146 STXBP6Q8NFX7 210 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms