RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CRYBB3P26998 211 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 RELQ04864 619 aaPredicted RBP7.97□□□□□ -1.13
LIG1-210ENST00000596332 SLC38A11Q08AI6 406 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 C9orf66Q5T8R8 295 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 FAM90A2PQ658T7 463 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 TMEM217Q8N7C4 229 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 ASB13Q8WXK3 278 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 SLC35E1Q96K37 410 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 C17orf77Q96MU5 243 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 MCRIP2Q9BUT9 160 aaKnown RBP7.97□□□□□ -1.13
LIG1-210ENST00000596332 VSIRQ9H7M9 311 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 SMPXQ9UHP9 88 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 CHEK1O14757 476 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 SAP30O75446 220 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 RLN2P04090 185 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 RD3LP0DJH9 198 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 PVALBP20472 110 aaPredicted RBP7.96□□□□□ -1.14
LIG1-210ENST00000596332 RPL12P30050 165 aaKnown RBP7.96□□□□□ -1.14
LIG1-210ENST00000596332 S100A11P31949 105 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 INSL3P51460 131 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 PATE2Q6UY27 113 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 MGST2Q99735 147 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 MRPL27Q9P0M9 148 aaKnown RBP7.96□□□□□ -1.14
LIG1-210ENST00000596332 SLC45A2Q9UMX9 530 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 WDR83OSQ9Y284 106 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 UFC1Q9Y3C8 167 aa7.96□□□□□ -1.14
LIG1-210ENST00000596332 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 ZFP92A6NM28 416 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 PRB2P02812 416 aaPredicted RBP7.95□□□□□ -1.14
LIG1-210ENST00000596332 PLP1P60201 277 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 CD300CQ08708 224 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 OR2F1Q13607 317 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 CD300EQ496F6 205 aaPredicted RBP7.95□□□□□ -1.14
LIG1-210ENST00000596332 Q8N1Y9 231 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 OR51G1Q8NGK1 321 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 OR5C1Q8NGR4 320 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 OR2T35Q8NGX2 323 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 AQP10Q96PS8 301 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 ELOVL1Q9BW60 279 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 RHPN1-AS1Q9BWJ2 59 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 DAZ1Q9NQZ3 744 aaKnown RBP7.95□□□□□ -1.14
LIG1-210ENST00000596332 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 TNFSF18Q9UNG2 199 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 HSPB11Q9Y547 144 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
LIG1-210ENST00000596332 IGHV3OR16-13A0A075B7E8 117 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 IGHV3-74A0A0B4J1X5 117 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 AGPAT2O15120 278 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 YIF1AO95070 293 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 PRR20EP86478 221 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 PRR20CP86479 221 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 PRR20DP86480 221 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 PRR20BP86481 221 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 PRR20AP86496 221 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 ATP6V1FQ16864 119 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 CYP2G1PQ6ZSU1 146 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 Q8WTZ3 238 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 MARC2Q969Z3 335 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 RNF2Q99496 336 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 TMEM147Q9BVK8 224 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 SLC25A31Q9H0C2 315 aa7.94□□□□□ -1.14
LIG1-210ENST00000596332 RGS13O14921 159 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 BUB3O43684 328 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 IL4P05112 153 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 AKR1C1Q04828 323 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 BAXQ07812 192 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 BTNL8Q6UX41 500 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 THAP6Q8TBB0 222 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 RNF125Q96EQ8 232 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 UQCC1Q9NVA1 299 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 C19orf73Q9NVV2 129 aa7.93□□□□□ -1.14
LIG1-210ENST00000596332 AURKAIP1Q9NWT8 199 aaPredicted RBP7.93□□□□□ -1.14
LIG1-210ENST00000596332 TECRQ9NZ01 308 aaKnown RBP7.93□□□□□ -1.14
LIG1-210ENST00000596332 ZNF256Q9Y2P7 627 aaPredicted RBP7.93□□□□□ -1.14
LIG1-210ENST00000596332 IGHV3-66A0A0C4DH42 116 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 SMCO3A2RU48 225 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 K7EIL1 84 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 PET100P0DJ07 73 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 NPPCP23582 126 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 FGL1Q08830 312 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 CLINT1Q14677 625 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 OPCMLQ14982 345 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 C16orf54Q6UWD8 224 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 ZNF546Q86UE3 836 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 STX12Q86Y82 276 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 OR2K2Q8NGT1 345 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 GLMPQ8WWB7 406 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 WDR61Q9GZS3 305 aaKnown RBP7.92□□□□□ -1.14
LIG1-210ENST00000596332 CYTL1Q9NRR1 136 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 SMAD5-AS1Q9Y6J3 95 aa7.92□□□□□ -1.14
LIG1-210ENST00000596332 DFFBO76075 338 aa7.91□□□□□ -1.14
LIG1-210ENST00000596332 CXCL2P19875 107 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms