RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 EDA2RQ9HAV5 297 aa8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 PAIP2BQ9ULR5 123 aaKnown RBP8.14□□□□□ -1.11
SHKBP1-206ENST00000595523 LYSTQ99698 3801 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 LOC102724200A0A096LPH7 203 aaPredicted RBP8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 ZFP92A6NM28 416 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 SSSCA1O60232 199 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 CCNKO75909 580 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 SCGB1D2O95969 90 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 CD5P06127 495 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 HNRNPCP07910 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 BMI1P35226 326 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 MZT2BQ6NZ67 158 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 APRG1Q8IVJ8 170 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 OR51G1Q8NGK1 321 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 GLMPQ8WWB7 406 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 SMIM8Q96KF7 97 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 TMEM231Q9H6L2 316 aa8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 STRAPQ9Y3F4 350 aaKnown RBP8.13□□□□□ -1.11
SHKBP1-206ENST00000595523 DYNC2H1Q8NCM8 4307 aaKnown RBP8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 TRAV2A0A0B4J234 112 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 A0A1W2PS18 150 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 K7EQG2 157 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 BUB3O43684 328 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 MBPP02686 304 aaPredicted RBP8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 C12orf45Q8N5I9 185 aaPredicted RBP8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 STPG3Q8N7X2 389 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 RNF125Q96EQ8 232 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 TRGV9Q99603 122 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 PSENENQ9NZ42 101 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 GSKIPQ9P0R6 139 aa8.12□□□□□ -1.11
SHKBP1-206ENST00000595523 C7orf66A4D0T2 115 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 OR2F1Q13607 317 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 TMEM182Q6ZP80 229 aaPredicted RBP8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 NRARPQ7Z6K4 114 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 STXBP6Q8NFX7 210 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 DCANP1Q8TF63 244 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 C11orf1Q9H5F2 150 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 RABAC1Q9UI14 185 aa8.11□□□□□ -1.11
SHKBP1-206ENST00000595523 DNASE2O00115 360 aaPredicted RBP8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 TSC22D2O75157 780 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 IL5P05113 134 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 RPL35AP18077 110 aaKnown RBP8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 TAS2R30P59541 319 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 PAFAH1B2P68402 229 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 ARL16Q0P5N6 197 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 IL15RAQ13261 267 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 OR8G2PQ6IF36 304 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 ENKURQ8TC29 256 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 GRAMD2BQ96HH9 432 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 NARS2Q96I59 477 aaKnown RBP8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 PBDC1Q9BVG4 233 aa8.1□□□□□ -1.11
SHKBP1-206ENST00000595523 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 FAM25EA8MYX2 175 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 K7EPK0 472 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 GATA2P23769 480 aaPredicted RBP8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 EIF2B2P49770 351 aaKnown RBP8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 CMC4P56277 68 aaPredicted RBP8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 DEFB131AP59861 70 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 LYZP61626 148 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 AKR1C1Q04828 323 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 LEMD1Q68G75 181 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 TMEM144Q7Z5S9 345 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 C2orf50Q96LR7 162 aa8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 PLECQ15149 4684 aaKnown RBP8.09□□□□□ -1.11
SHKBP1-206ENST00000595523 C5orf51A6NDU8 294 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 HELTA6NFD8 242 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 SNRPGP15A8MWD9 76 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 C3orf84H3BNL1 204 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 FABP1P07148 127 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 ZNF688P0C7X2 276 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 APOC4P55056 127 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 RRAS2P62070 204 aaPredicted RBP8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 DLK1P80370 383 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 DEFB135Q30KP9 77 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 SIGLEC15Q6ZMC9 328 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 Q6ZWC4 215 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 LSM5Q9Y4Y9 91 aaKnown RBP8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 RYR2Q92736 4967 aa8.08□□□□□ -1.12
SHKBP1-206ENST00000595523 SMCO3A2RU48 225 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 FNDC10F2Z333 226 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 UBE2CO00762 179 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 CASC10Q5T4H9 136 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 GSG1LQ6UXU4 331 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 MARVELD1Q9BSK0 173 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms