RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ZNF701M0R085 212 aaPredicted RBP17.14■□□□□ 0.33
LSM4-204ENST00000594828 SFT2D2O95562 160 aa17.14■□□□□ 0.33
LSM4-204ENST00000594828 RAB11AP62491 216 aa17.14■□□□□ 0.33
LSM4-204ENST00000594828 PPP1R1AQ13522 171 aa17.14■□□□□ 0.33
LSM4-204ENST00000594828 MORN3Q6PF18 240 aaPredicted RBP17.14■□□□□ 0.33
LSM4-204ENST00000594828 PHLDA1Q8WV24 401 aaPredicted RBP17.14■□□□□ 0.33
LSM4-204ENST00000594828 C11orf68Q9H3H3 251 aaKnown RBP17.14■□□□□ 0.33
LSM4-204ENST00000594828 TMED3Q9Y3Q3 217 aa17.14■□□□□ 0.33
LSM4-204ENST00000594828 FAM90A26D6RGX4 464 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 LY6G6CO95867 125 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 SPP1P10451 314 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 IAPPP10997 89 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 TMEM41BQ5BJD5 291 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 PSMG4Q5JS54 123 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 ACTL10Q5JWF8 245 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 SIGLEC15Q6ZMC9 328 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 CENPSQ8N2Z9 138 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 C11orf45Q8TAV5 145 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 RNF125Q96EQ8 232 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 PBDC1Q9BVG4 233 aa17.13■□□□□ 0.33
LSM4-204ENST00000594828 MED6O75586 246 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 GIG44P09565 113 aaPredicted RBP17.12■□□□□ 0.33
LSM4-204ENST00000594828 ZNF90Q03938 601 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 RAB40CQ96S21 281 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 SRRQ9GZT4 340 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 MFFQ9GZY8 342 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 NRN1Q9NPD7 142 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 PFDN2Q9UHV9 154 aa17.12■□□□□ 0.33
LSM4-204ENST00000594828 PAIP2BQ9ULR5 123 aaKnown RBP17.12■□□□□ 0.33
LSM4-204ENST00000594828 ALMS1Q8TCU4 4167 aa17.11■□□□□ 0.33
LSM4-204ENST00000594828 IGKV1D-37A0A075B6S9 117 aa17.11■□□□□ 0.33
LSM4-204ENST00000594828 DEFB4AO15263 64 aa17.11■□□□□ 0.33
LSM4-204ENST00000594828 NANOS2P60321 138 aaKnown RBP17.11■□□□□ 0.33
LSM4-204ENST00000594828 SNRPD3P62318 126 aaKnown RBP17.11■□□□□ 0.33
LSM4-204ENST00000594828 SEPSECSQ9HD40 501 aaKnown RBP17.11■□□□□ 0.33
LSM4-204ENST00000594828 FABP1P07148 127 aa17.1■□□□□ 0.33
LSM4-204ENST00000594828 HOXB5P09067 269 aa17.1■□□□□ 0.33
LSM4-204ENST00000594828 NUP62P37198 522 aaPredicted RBP17.1■□□□□ 0.33
LSM4-204ENST00000594828 INPP1P49441 399 aa17.1■□□□□ 0.33
LSM4-204ENST00000594828 CIB3Q96Q77 187 aaPredicted RBP17.1■□□□□ 0.33
LSM4-204ENST00000594828 SNRPGP15A8MWD9 76 aa17.09■□□□□ 0.33
LSM4-204ENST00000594828 RPP30P78346 268 aaKnown RBP17.09■□□□□ 0.33
LSM4-204ENST00000594828 OR8G2PQ6IF36 304 aa17.09■□□□□ 0.33
LSM4-204ENST00000594828 MAGT1Q9H0U3 335 aa17.09■□□□□ 0.33
LSM4-204ENST00000594828 FBXL17Q9UF56 701 aa17.09■□□□□ 0.33
LSM4-204ENST00000594828 AGRNO00468 2067 aa17.08■□□□□ 0.33
LSM4-204ENST00000594828 WRBO00258 174 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 SYNGR2O43760 224 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 C4BPBP20851 252 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 UBE2MP61081 183 aaKnown RBP17.08■□□□□ 0.32
LSM4-204ENST00000594828 BAK1Q16611 211 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 GGNBP1Q5YKI7 109 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 TRIQKQ629K1 86 aa17.08■□□□□ 0.32
LSM4-204ENST00000594828 NAP1L6A6NFF2 107 aa17.07■□□□□ 0.32
LSM4-204ENST00000594828 LYZP61626 148 aa17.07■□□□□ 0.32
LSM4-204ENST00000594828 OR2F1Q13607 317 aa17.07■□□□□ 0.32
LSM4-204ENST00000594828 Q8NAQ8 132 aa17.07■□□□□ 0.32
LSM4-204ENST00000594828 TRGV9Q99603 122 aa17.07■□□□□ 0.32
LSM4-204ENST00000594828 CLEC5AQ9NY25 188 aa17.06■□□□□ 0.32
LSM4-204ENST00000594828 C9orf170A2RU37 121 aa17.05■□□□□ 0.32
LSM4-204ENST00000594828 ZNF705EA8MWA4 302 aaPredicted RBP17.05■□□□□ 0.32
LSM4-204ENST00000594828 NDUFB6O95139 128 aa17.05■□□□□ 0.32
LSM4-204ENST00000594828 MIFP14174 115 aa17.05■□□□□ 0.32
LSM4-204ENST00000594828 NUTF2P61970 127 aaKnown RBP17.05■□□□□ 0.32
LSM4-204ENST00000594828 C1orf194Q5T5A4 169 aa17.05■□□□□ 0.32
LSM4-204ENST00000594828 THAP8Q8NA92 274 aa17.05■□□□□ 0.32
LSM4-204ENST00000594828 IGKV1OR2-108A0A075B7D4 117 aa17.04■□□□□ 0.32
LSM4-204ENST00000594828 IGHV4-28A0A0C4DH34 117 aa17.04■□□□□ 0.32
LSM4-204ENST00000594828 SPANXN5Q5MJ07 72 aa17.04■□□□□ 0.32
LSM4-204ENST00000594828 CSNK1G2-AS1Q8NCQ2 148 aa17.04■□□□□ 0.32
LSM4-204ENST00000594828 PPP1R14BQ96C90 147 aa17.04■□□□□ 0.32
LSM4-204ENST00000594828 LINC00854A0A1B0GVQ3 168 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 H3BMM0 161 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 ADAP1O75689 374 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 RBMY1A1P0DJD3 496 aaKnown RBP17.03■□□□□ 0.32
LSM4-204ENST00000594828 RBMY1CP0DJD4 496 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 NKX2-1P43699 371 aaPredicted RBP17.03■□□□□ 0.32
LSM4-204ENST00000594828 RBMY1FQ15415 496 aaKnown RBP17.03■□□□□ 0.32
LSM4-204ENST00000594828 C1QTNF4Q9BXJ3 329 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 TBC1D24Q9ULP9 559 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 FLVCR2Q9UPI3 526 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 X6R8D5 127 aa17.03■□□□□ 0.32
LSM4-204ENST00000594828 EPPK1P58107 5090 aaKnown RBP17.03■□□□□ 0.32
LSM4-204ENST00000594828 PRSS46E5RG02 174 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 CFDP00746 253 aaPredicted RBP17.02■□□□□ 0.32
LSM4-204ENST00000594828 ID1P41134 155 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 ID3Q02535 119 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 COQ8AQ8NI60 647 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 LINC00052Q96N35 136 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 SDHCQ99643 169 aaPredicted RBP17.02■□□□□ 0.32
LSM4-204ENST00000594828 WDR12Q9GZL7 423 aaKnown RBP17.02■□□□□ 0.32
LSM4-204ENST00000594828 HRH4Q9H3N8 390 aa17.02■□□□□ 0.32
LSM4-204ENST00000594828 STRAPQ9Y3F4 350 aaKnown RBP17.02■□□□□ 0.32
LSM4-204ENST00000594828 CENPXA8MT69 81 aa17.01■□□□□ 0.31
LSM4-204ENST00000594828 H3BP45 60 aa17.01■□□□□ 0.31
LSM4-204ENST00000594828 OR4E1P0C645 316 aa17.01■□□□□ 0.31
LSM4-204ENST00000594828 OR8I2Q8N0Y5 310 aa17.01■□□□□ 0.31
LSM4-204ENST00000594828 C2CD4CQ8TF44 421 aa17.01■□□□□ 0.31
LSM4-204ENST00000594828 IFNA21P01568 189 aa17■□□□□ 0.31
LSM4-204ENST00000594828 HLA-DRB4P13762 266 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms