RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 NDUFB6O95139 128 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 SPP1P10451 314 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 SLC25A4P12235 298 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 SLC25A6P12236 298 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 MIFP14174 115 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 NPPCP23582 126 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 CRYBB3P26998 211 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 RND2P52198 227 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 TIGITQ495A1 244 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 MORN3Q6PF18 240 aaPredicted RBP10.71□□□□□ -0.69
PNKP-202ENST00000593706 DTD1Q8TEA8 209 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 NARS2Q96I59 477 aaKnown RBP10.71□□□□□ -0.69
PNKP-202ENST00000593706 METTL26Q96S19 204 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 MUC4Q99102 2169 aa10.71□□□□□ -0.69
PNKP-202ENST00000593706 TRAV10A0A0B4J240 114 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 SFT2D2O95562 160 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 ZNF688P0C7X2 276 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 VAMP1P23763 118 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 Q6ZTC4 211 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
PNKP-202ENST00000593706 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 U3KQ87 197 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 U3KQE9 123 aa10.7□□□□□ -0.7
PNKP-202ENST00000593706 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 TRAV30A0A087WSZ9 112 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 NAP1L6A6NFF2 107 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
PNKP-202ENST00000593706 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 IL7P13232 177 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 C4BPBP20851 252 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 P2RY1P47900 373 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 UBE2MP61081 183 aaKnown RBP10.69□□□□□ -0.7
PNKP-202ENST00000593706 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
PNKP-202ENST00000593706 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
PNKP-202ENST00000593706 OR1S2Q8NGQ3 325 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
PNKP-202ENST00000593706 KNCNA6PVL3 124 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 K7EQG2 157 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 OR10J1P30954 320 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
PNKP-202ENST00000593706 ACTL10Q5JWF8 245 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 TRIQKQ629K1 86 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 NOXA1Q86UR1 476 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 NPIPB3Q92617 1050 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 CLEC5AQ9NY25 188 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 TBC1D24Q9ULP9 559 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 FLVCR2Q9UPI3 526 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 TMED3Q9Y3Q3 217 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
PNKP-202ENST00000593706 C9orf170A2RU37 121 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 ZNF705EA8MWA4 302 aaPredicted RBP10.67□□□□□ -0.7
PNKP-202ENST00000593706 FAM90A26D6RGX4 464 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 IFNA10P01566 189 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
PNKP-202ENST00000593706 ATP5IP56385 69 aaPredicted RBP10.67□□□□□ -0.7
PNKP-202ENST00000593706 LINC00336Q6ZUF6 198 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 OR1S1Q8NH92 325 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 PKD1P98161 4303 aa10.67□□□□□ -0.7
PNKP-202ENST00000593706 IGKV1D-37A0A075B6S9 117 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
PNKP-202ENST00000593706 A6NHS1 94 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 PRSS46E5RG02 174 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 DHRS2Q13268 280 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 USF2Q15853 346 aaPredicted RBP10.66□□□□□ -0.7
PNKP-202ENST00000593706 GGNBP1Q5YKI7 109 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 ETFRF1Q6IPR1 90 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 ACY3Q96HD9 319 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 C7orf50Q9BRJ6 194 aaKnown RBP10.66□□□□□ -0.7
PNKP-202ENST00000593706 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 X6R8D5 127 aa10.66□□□□□ -0.7
PNKP-202ENST00000593706 HELTA6NFD8 242 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 PLA2G10O15496 165 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 TOMM40O96008 361 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 AMBPP02760 352 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 GPX4P36969 197 aaPredicted RBP10.65□□□□□ -0.7
PNKP-202ENST00000593706 GAMTQ14353 236 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 ZNF767PQ75MW2 155 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 DCANP1Q8TF63 244 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 GLMPQ8WWB7 406 aa10.65□□□□□ -0.7
PNKP-202ENST00000593706 DEFB131BA0A096LNP1 70 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 LINC00854A0A1B0GVQ3 168 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 ADAP1O75689 374 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 HOXB5P09067 269 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 OR4E1P0C645 316 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 IAPPP10997 89 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 ANXA7P20073 488 aaKnown RBP10.64□□□□□ -0.71
PNKP-202ENST00000593706 CELA1Q9UNI1 258 aa10.64□□□□□ -0.71
PNKP-202ENST00000593706 IGKV1OR2-108A0A075B7D4 117 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 SYNGR2O43760 224 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 IL4P05112 153 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 RD3LP0DJH9 198 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 P0DMU3 169 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 PSG1P11464 419 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 INPP1P49441 399 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 ID3Q02535 119 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms