RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 HNRNPCP07910 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIG3-215ENST00000592690 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
LIG3-215ENST00000592690 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
LIG3-215ENST00000592690 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
LIG3-215ENST00000592690 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
LIG3-215ENST00000592690 MAP6D1Q9H9H5 199 aa11.65□□□□□ -0.54
LIG3-215ENST00000592690 STRAPQ9Y3F4 350 aaKnown RBP11.65□□□□□ -0.54
LIG3-215ENST00000592690 AGRNO00468 2067 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 RYR3Q15413 4870 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 PAX9P55771 341 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 FAM24BQ8N5W8 94 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 RNF125Q96EQ8 232 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 NARS2Q96I59 477 aaKnown RBP11.64□□□□□ -0.55
LIG3-215ENST00000592690 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 GSKIPQ9P0R6 139 aa11.64□□□□□ -0.55
LIG3-215ENST00000592690 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
LIG3-215ENST00000592690 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
LIG3-215ENST00000592690 CCNKO75909 580 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 OR2F1Q13607 317 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 ACOT7LQ6ZUV0 252 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
LIG3-215ENST00000592690 THAP8Q8NA92 274 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 ENKURQ8TC29 256 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 SMIM8Q96KF7 97 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 TRGV9Q99603 122 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 EDA2RQ9HAV5 297 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
LIG3-215ENST00000592690 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
LIG3-215ENST00000592690 PMS2P5A8MQ11 134 aa11.62□□□□□ -0.55
LIG3-215ENST00000592690 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
LIG3-215ENST00000592690 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
LIG3-215ENST00000592690 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
LIG3-215ENST00000592690 OR8G2PQ6IF36 304 aa11.62□□□□□ -0.55
LIG3-215ENST00000592690 K7EQG2 157 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 BUB3O43684 328 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 LYZP61626 148 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 AKR1C1Q04828 323 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 NRARPQ7Z6K4 114 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 DCANP1Q8TF63 244 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 RAB40CQ96S21 281 aa11.61□□□□□ -0.55
LIG3-215ENST00000592690 C5orf51A6NDU8 294 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 FABP1P07148 127 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 EIF2B2P49770 351 aaKnown RBP11.6□□□□□ -0.55
LIG3-215ENST00000592690 APOC4P55056 127 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
LIG3-215ENST00000592690 DEFB131AP59861 70 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
LIG3-215ENST00000592690 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 C7orf66A4D0T2 115 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 HELTA6NFD8 242 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 SNRPGP15A8MWD9 76 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 TSC22D2O75157 780 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 IL5P05113 134 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 TAS2R30P59541 319 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 RRAS2P62070 204 aaPredicted RBP11.59□□□□□ -0.55
LIG3-215ENST00000592690 SIGLEC15Q6ZMC9 328 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
LIG3-215ENST00000592690 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
LIG3-215ENST00000592690 LSM5Q9Y4Y9 91 aaKnown RBP11.59□□□□□ -0.55
LIG3-215ENST00000592690 K7EPK0 472 aa11.58□□□□□ -0.56
LIG3-215ENST00000592690 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
LIG3-215ENST00000592690 GATA2P23769 480 aaPredicted RBP11.58□□□□□ -0.56
LIG3-215ENST00000592690 DEFB135Q30KP9 77 aa11.58□□□□□ -0.56
LIG3-215ENST00000592690 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
LIG3-215ENST00000592690 C2orf50Q96LR7 162 aa11.58□□□□□ -0.56
LIG3-215ENST00000592690 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
LIG3-215ENST00000592690 DLK1P80370 383 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 ARL16Q0P5N6 197 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 GSG1LQ6UXU4 331 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 KIR2DL5BQ8NHK3 375 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
LIG3-215ENST00000592690 L7N2F9 121 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 UBE2CO00762 179 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
LIG3-215ENST00000592690 VAMP2P63027 116 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 IL15RAQ13261 267 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 Q6ZWC4 215 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 GPN1Q9HCN4 374 aaPredicted RBP11.56□□□□□ -0.56
LIG3-215ENST00000592690 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
LIG3-215ENST00000592690 INMT-MINDY4F8WBC2 141 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 SPRY2O43597 315 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
LIG3-215ENST00000592690 DEFA1P59665 94 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 DEFA3P59666 94 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms