RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NDUFB6O95139 128 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 ZNF688P0C7X2 276 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 PSG1P11464 419 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 PMS2P11Q13670 270 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 GAMTQ14353 236 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 OR51G1Q8NGK1 321 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 SLC35E1Q96K37 410 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 C7orf50Q9BRJ6 194 aaKnown RBP10.18□□□□□ -0.78
APOC1-208ENST00000592535 MAGT1Q9H0U3 335 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 FLVCR2Q9UPI3 526 aa10.18□□□□□ -0.78
APOC1-208ENST00000592535 IGKV1D-37A0A075B6S9 117 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 C9orf170A2RU37 121 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 HELTA6NFD8 242 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 ZFP92A6NM28 416 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 CA1P00915 261 aaPredicted RBP10.17□□□□□ -0.78
APOC1-208ENST00000592535 GPX4P36969 197 aaPredicted RBP10.17□□□□□ -0.78
APOC1-208ENST00000592535 EIF2B2P49770 351 aaKnown RBP10.17□□□□□ -0.78
APOC1-208ENST00000592535 UBE2MP61081 183 aaKnown RBP10.17□□□□□ -0.78
APOC1-208ENST00000592535 ZNF90Q03938 601 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 DHRS2Q13268 280 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 GATAD1Q8WUU5 269 aa10.17□□□□□ -0.78
APOC1-208ENST00000592535 PAIP2BQ9ULR5 123 aaKnown RBP10.17□□□□□ -0.78
APOC1-208ENST00000592535 CXorf65A6NEN9 183 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 WRBO00258 174 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 BUB3O43684 328 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 SYNGR2O43760 224 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 MED6O75586 246 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 ADAP1O75689 374 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 JTBO76095 146 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 BTCP35070 178 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 RAB11AP62491 216 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 STHQ8IWL8 128 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 RNF125Q96EQ8 232 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 RARRES2Q99969 163 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 PBDC1Q9BVG4 233 aa10.16□□□□□ -0.78
APOC1-208ENST00000592535 LYRM1O43325 122 aa10.15□□□□□ -0.78
APOC1-208ENST00000592535 AP2S1P53680 142 aaPredicted RBP10.15□□□□□ -0.78
APOC1-208ENST00000592535 SIGLEC15Q6ZMC9 328 aa10.15□□□□□ -0.78
APOC1-208ENST00000592535 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
APOC1-208ENST00000592535 CIB3Q96Q77 187 aaPredicted RBP10.15□□□□□ -0.78
APOC1-208ENST00000592535 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 OR4E1P0C645 316 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 ATF4P18848 351 aaPredicted RBP10.14□□□□□ -0.79
APOC1-208ENST00000592535 ANXA7P20073 488 aaKnown RBP10.14□□□□□ -0.79
APOC1-208ENST00000592535 DEFA1P59665 94 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 DEFA3P59666 94 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 LYZP61626 148 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 OR2F1Q13607 317 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
APOC1-208ENST00000592535 IGKV1OR2-108A0A075B7D4 117 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 CENPXA8MT69 81 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 H3BP45 60 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 GIG44P09565 113 aaPredicted RBP10.13□□□□□ -0.79
APOC1-208ENST00000592535 C4BPBP20851 252 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
APOC1-208ENST00000592535 OXA1LQ15070 435 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 SPANXN5Q5MJ07 72 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 OR8G2PQ6IF36 304 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 MZT2BQ6NZ67 158 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 COQ8AQ8NI60 647 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 TRGV9Q99603 122 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 LYSTQ99698 3801 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 NRN1Q9NPD7 142 aa10.13□□□□□ -0.79
APOC1-208ENST00000592535 DNAH1Q9P2D7 4330 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 SNRPGP15A8MWD9 76 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 PTTG1O95997 202 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 FABP1P07148 127 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 NUP62P37198 522 aaPredicted RBP10.12□□□□□ -0.79
APOC1-208ENST00000592535 POLR2GP62487 172 aaKnown RBP eCLIP10.12□□□□□ -0.79
APOC1-208ENST00000592535 ID3Q02535 119 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 RGS21Q2M5E4 152 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
APOC1-208ENST00000592535 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 RAB40CQ96S21 281 aa10.12□□□□□ -0.79
APOC1-208ENST00000592535 DEFB4AO15263 64 aa10.11□□□□□ -0.79
APOC1-208ENST00000592535 IFNA21P01568 189 aa10.11□□□□□ -0.79
APOC1-208ENST00000592535 SPP1P10451 314 aa10.11□□□□□ -0.79
APOC1-208ENST00000592535 NKX2-1P43699 371 aaPredicted RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 SEPSECSQ9HD40 501 aaKnown RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 PFDN2Q9UHV9 154 aa10.11□□□□□ -0.79
APOC1-208ENST00000592535 STRAPQ9Y3F4 350 aaKnown RBP10.11□□□□□ -0.79
APOC1-208ENST00000592535 ALMS1Q8TCU4 4167 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 TCRBP04435 133 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 GSG1LQ6UXU4 331 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 ACOT7LQ6ZUV0 252 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms