RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ARRDC1	Q8N5I2	433 aa		12.97	□□□□□ -0.33
CIRBP-238	ENST00000592412	RRNAD1	Q96FB5	475 aa	Known RBP	12.97	□□□□□ -0.33
CIRBP-238	ENST00000592412	IGHV3OR16-12	A0A075B7B8	117 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	TMEM189	A5PLL7	270 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	SMIM9	A6NGZ8	99 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	TOMM40	O96008	361 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	IGKV3-20	P01619	116 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	SLC25A4	P12235	298 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	RNF212	Q495C1	297 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	RNASE10	Q5GAN6	216 aa	Known RBP	12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	GSG1L	Q6UXU4	331 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	OR13C8	Q8NGS7	320 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	C15orf40	Q8WUR7	153 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	NPIPB3	Q92617	1050 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	WDR12	Q9GZL7	423 aa	Known RBP	12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	SLIRP	Q9GZT3	109 aa	Known RBP	12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	RSL24D1	Q9UHA3	163 aa	Known RBP	12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	RFNG	Q9Y644	331 aa		12.96	□□□□□ -0.33
CIRBP-238	ENST00000592412	CDS2	O95674	445 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	SLC24A4	Q8NFF2	622 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	OR52I2	Q8NH67	350 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	MCFD2	Q8NI22	146 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	NIPSNAP3B	Q9BS92	247 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	TMEM222	Q9H0R3	208 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	RBM38	Q9H0Z9	239 aa	Known RBP	12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	SAV1	Q9H4B6	383 aa	Predicted RBP	12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	HEYL	Q9NQ87	328 aa	Predicted RBP	12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	COPZ2	Q9P299	210 aa		12.95	□□□□□ -0.34
CIRBP-238	ENST00000592412	SOCS3	O14543	225 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	OR5AC1	P0C628	307 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	RD3L	P0DJH9	198 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	PSG1	P11464	419 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	C1orf134	Q5TEV5	83 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	FAM219A	Q8IW50	185 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	C1orf158	Q8N1D5	194 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	OR51G1	Q8NGK1	321 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	TERB2	Q8NHR7	220 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	RNASE11	Q8TAA1	199 aa	Known RBP	12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	MARCH1	Q8TCQ1	289 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	GLYATL2	Q8WU03	294 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	GPR146	Q96CH1	333 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	DIRAS2	Q96HU8	199 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	ABHD1	Q96SE0	405 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	SLC35B3	Q9H1N7	401 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	CACNG5	Q9UF02	275 aa		12.94	□□□□□ -0.34
CIRBP-238	ENST00000592412	OXA1L	Q15070	435 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	ZNF79	Q15937	498 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	TMEM88	Q6PEY1	159 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	CCDC71L	Q8N9Z2	235 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	ACY3	Q96HD9	319 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	CLUHP3	Q96NS8	147 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	MTFP1	Q9UDX5	166 aa		12.93	□□□□□ -0.34
CIRBP-238	ENST00000592412	ZNF701	M0R085	212 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	GSTZ1	O43708	216 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	HTN3	P15516	51 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	TBP	P20226	339 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	MEF2D	Q14814	521 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	SOHLH1	Q5JUK2	328 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	FOXI2	Q6ZQN5	318 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	SELENOH	Q8IZQ5	122 aa	Known RBP	12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	ZFAND1	Q8TCF1	268 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	RNF125	Q96EQ8	232 aa		12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.92	□□□□□ -0.34
CIRBP-238	ENST00000592412	TEX48	A0A1B0GUV7	120 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412		F6UB75	175 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	B3GALNT1	O75752	331 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	TNP2	Q05952	138 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	IL18	Q14116	193 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	NMS	Q5H8A3	153 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	RBPMS	Q93062	196 aa	Known RBP	12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	RABL2B	Q9UNT1	228 aa		12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.91	□□□□□ -0.34
CIRBP-238	ENST00000592412	IGKV1D-37	A0A075B6S9	117 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	CEBPZOS	A8MTT3	80 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	GABARAP	H6UMI1	98 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	TNFSF8	P32971	234 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	MRPS10	P82664	201 aa	Known RBP	12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	SCGB2B2	Q4G0G5	96 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	ETFRF1	Q6IPR1	90 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	OR4B1	Q8NGF8	309 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	LINC00052	Q96N35	136 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	NAA60	Q9H7X0	242 aa		12.9	□□□□□ -0.34
CIRBP-238	ENST00000592412	LOC102723971	A0A1B0GUV8	181 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	CDK2AP2	O75956	126 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	PSMB3	P49720	205 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	PAX9	P55771	341 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	FAAP20	Q6NZ36	180 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	TMEM229B	Q8NBD8	167 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	PBDC1	Q9BVG4	233 aa		12.89	□□□□□ -0.35
CIRBP-238	ENST00000592412	TAS2R19	P59542	299 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	ZNF90	Q03938	601 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	FAM78B	Q5VT40	261 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	TMEM268	Q5VZI3	342 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	OR8G2P	Q6IF36	304 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	SMIM4	Q8WVI0	70 aa		12.88	□□□□□ -0.35
CIRBP-238	ENST00000592412	C17orf77	Q96MU5	243 aa		12.88	□□□□□ -0.35

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