RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SMIM8	Q96KF7	97 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	C11orf1	Q9H5F2	150 aa		12.81	□□□□□ -0.36
MBD1-221	ENST00000589867	SSSCA1	O60232	199 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	MBP	P02686	304 aa	Predicted RBP	12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	C16orf54	Q6UWD8	224 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	TMEM14EP	Q6UXP3	125 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	APRG1	Q8IVJ8	170 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	OR51G1	Q8NGK1	321 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	SLC35E1	Q96K37	410 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	TRGV9	Q99603	122 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	GGTLC1	Q9BX51	225 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	MAP6D1	Q9H9H5	199 aa		12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	PAIP2B	Q9ULR5	123 aa	Known RBP	12.8	□□□□□ -0.36
MBD1-221	ENST00000589867	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	SCGB2A1	O75556	95 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	IL5	P05113	134 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	IL15RA	Q13261	267 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	MZT2B	Q6NZ67	158 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	TMEM182	Q6ZP80	229 aa	Predicted RBP	12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	WFDC3	Q8IUB2	231 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	PSENEN	Q9NZ42	101 aa		12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	STRAP	Q9Y3F4	350 aa	Known RBP	12.79	□□□□□ -0.36
MBD1-221	ENST00000589867	TRAV2	A0A0B4J234	112 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867		A0A1W2PS18	150 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	ZFP92	A6NM28	416 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867		K7EQG2	157 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	BUB3	O43684	328 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	CD5	P06127	495 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	BMI1	P35226	326 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	ARL16	Q0P5N6	197 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	ACOT7L	Q6ZUV0	252 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	NRARP	Q7Z6K4	114 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	DCANP1	Q8TF63	244 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	RNF125	Q96EQ8	232 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	TMEM231	Q9H6L2	316 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	GSKIP	Q9P0R6	139 aa		12.78	□□□□□ -0.36
MBD1-221	ENST00000589867	C7orf66	A4D0T2	115 aa		12.77	□□□□□ -0.37
MBD1-221	ENST00000589867	SCGB1D2	O95969	90 aa		12.77	□□□□□ -0.37
MBD1-221	ENST00000589867	RPP30	P78346	268 aa	Known RBP	12.77	□□□□□ -0.37
MBD1-221	ENST00000589867	OR2F1	Q13607	317 aa		12.77	□□□□□ -0.37
MBD1-221	ENST00000589867	METTL15P1	P0C7V9	234 aa		12.76	□□□□□ -0.37
MBD1-221	ENST00000589867	TAS2R30	P59541	319 aa		12.76	□□□□□ -0.37
MBD1-221	ENST00000589867	RAB40C	Q96S21	281 aa		12.76	□□□□□ -0.37
MBD1-221	ENST00000589867	OVOL2	Q9BRP0	275 aa		12.76	□□□□□ -0.37
MBD1-221	ENST00000589867		K7EPK0	472 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	TSC22D2	O75157	780 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	RPL35A	P18077	110 aa	Known RBP	12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	GATA2	P23769	480 aa	Predicted RBP	12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	DEFB131A	P59861	70 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	OR8G2P	Q6IF36	304 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	TMEM144	Q7Z5S9	345 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	C2orf50	Q96LR7	162 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	LYST	Q99698	3801 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	RABAC1	Q9UI14	185 aa		12.75	□□□□□ -0.37
MBD1-221	ENST00000589867	DNASE2	O00115	360 aa	Predicted RBP	12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	EIF2B2	P49770	351 aa	Known RBP	12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	RPL11	P62913	178 aa	Known RBP	12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	PAFAH1B2	P68402	229 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	LEMD1	Q68G75	181 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	STXBP6	Q8NFX7	210 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	ENKUR	Q8TC29	256 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	C17orf77	Q96MU5	243 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	PBDC1	Q9BVG4	233 aa		12.74	□□□□□ -0.37
MBD1-221	ENST00000589867	TENM2	Q9NT68	2774 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	KIR2DL5B	A0A0G2JN68	375 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	KIR2DL5B	A0A0G2JPC4	375 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	FAM25E	A8MYX2	175 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	LYZ	P61626	148 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	DLK1	P80370	383 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	GSG1L	Q6UXU4	331 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	KIR2DL5A	Q8N109	375 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	KIR2DL5B	Q8NHK3	375 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	MUC7	Q8TAX7	377 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	MARVELD1	Q9BSK0	173 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	SACS	Q9NZJ4	4579 aa		12.73	□□□□□ -0.37
MBD1-221	ENST00000589867	C5orf51	A6NDU8	294 aa		12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	SNRPGP15	A8MWD9	76 aa		12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	ZNF688	P0C7X2	276 aa		12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	CMC4	P56277	68 aa	Predicted RBP	12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	RRAS2	P62070	204 aa	Predicted RBP	12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	GRAMD2B	Q96HH9	432 aa		12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	NARS2	Q96I59	477 aa	Known RBP	12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	LSM5	Q9Y4Y9	91 aa	Known RBP	12.72	□□□□□ -0.37
MBD1-221	ENST00000589867	HELT	A6NFD8	242 aa		12.71	□□□□□ -0.37
MBD1-221	ENST00000589867	INMT-MINDY4	F8WBC2	141 aa		12.71	□□□□□ -0.37
MBD1-221	ENST00000589867	AKR1C1	Q04828	323 aa		12.71	□□□□□ -0.37
MBD1-221	ENST00000589867	RAB32	Q13637	225 aa		12.71	□□□□□ -0.37
MBD1-221	ENST00000589867	SIGLEC15	Q6ZMC9	328 aa		12.71	□□□□□ -0.37
MBD1-221	ENST00000589867	RYR3	Q15413	4870 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	FAM24A	A6NFZ4	105 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	FNDC10	F2Z333	226 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	SOCS3	O14543	225 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	SIX6	O95475	246 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	GIG44	P09565	113 aa	Predicted RBP	12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	APOC4	P55056	127 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	DEFB135	Q30KP9	77 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	CYP2G1P	Q6ZSU1	146 aa		12.7	□□□□□ -0.38
MBD1-221	ENST00000589867		Q6ZWC4	215 aa		12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms