RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 RARRES2Q99969 163 aa14.05□□□□□ -0.16
CCDC130-209ENST00000588809 C11orf68Q9H3H3 251 aaKnown RBP14.05□□□□□ -0.16
CCDC130-209ENST00000588809 IGKV1D-37A0A075B6S9 117 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 NAP1L6A6NFF2 107 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 ZNF688P0C7X2 276 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 PMS2P11Q13670 270 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 BAK1Q16611 211 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
CCDC130-209ENST00000588809 SEPSECSQ9HD40 501 aaKnown RBP14.04□□□□□ -0.16
CCDC130-209ENST00000588809 MED6O75586 246 aa14.03□□□□□ -0.16
CCDC130-209ENST00000588809 DHRS2Q13268 280 aa14.03□□□□□ -0.16
CCDC130-209ENST00000588809 TMEM41BQ5BJD5 291 aa14.03□□□□□ -0.16
CCDC130-209ENST00000588809 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
CCDC130-209ENST00000588809 SLC35E1Q96K37 410 aa14.03□□□□□ -0.16
CCDC130-209ENST00000588809 CIB3Q96Q77 187 aaPredicted RBP14.03□□□□□ -0.16
CCDC130-209ENST00000588809 KMT2AQ03164 3969 aa14.02□□□□□ -0.16
CCDC130-209ENST00000588809 ZFP92A6NM28 416 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 NDUFB6O95139 128 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 GIG44P09565 113 aaPredicted RBP14.02□□□□□ -0.17
CCDC130-209ENST00000588809 SPP1P10451 314 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 NUP62P37198 522 aaPredicted RBP14.02□□□□□ -0.17
CCDC130-209ENST00000588809 RAB11AP62491 216 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 OR8G2PQ6IF36 304 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 CEMP1Q6PRD7 247 aaPredicted RBP14.02□□□□□ -0.17
CCDC130-209ENST00000588809 SIGLEC15Q6ZMC9 328 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 SDHCQ99643 169 aaPredicted RBP14.02□□□□□ -0.17
CCDC130-209ENST00000588809 NRN1Q9NPD7 142 aa14.02□□□□□ -0.17
CCDC130-209ENST00000588809 C9orf170A2RU37 121 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 PRSS46E5RG02 174 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 SYNGR2O43760 224 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 IAPPP10997 89 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 ZNF90Q03938 601 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 GGNBP1Q5YKI7 109 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 TRIQKQ629K1 86 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-209ENST00000588809 LINC00476Q8WZB0 136 aa14.01□□□□□ -0.17
CCDC130-209ENST00000588809 IGKV1OR2-108A0A075B7D4 117 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 FABP1P07148 127 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 HOXB5P09067 269 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 INPP1P49441 399 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 THAP8Q8NA92 274 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 TRGV9Q99603 122 aa14□□□□□ -0.17
CCDC130-209ENST00000588809 KNCNA6PVL3 124 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 C4BPBP20851 252 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 BTCP35070 178 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 SNRPD3P62318 126 aaKnown RBP13.99□□□□□ -0.17
CCDC130-209ENST00000588809 RPP30P78346 268 aaKnown RBP13.99□□□□□ -0.17
CCDC130-209ENST00000588809 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 ACTL10Q5JWF8 245 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 RAB40CQ96S21 281 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 MAGT1Q9H0U3 335 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 PFDN2Q9UHV9 154 aa13.99□□□□□ -0.17
CCDC130-209ENST00000588809 WRBO00258 174 aa13.98□□□□□ -0.17
CCDC130-209ENST00000588809 C1orf194Q5T5A4 169 aa13.98□□□□□ -0.17
CCDC130-209ENST00000588809 C7orf50Q9BRJ6 194 aaKnown RBP13.98□□□□□ -0.17
CCDC130-209ENST00000588809 PBDC1Q9BVG4 233 aa13.98□□□□□ -0.17
CCDC130-209ENST00000588809 KLK5Q9Y337 293 aaPredicted RBP13.98□□□□□ -0.17
CCDC130-209ENST00000588809 FRAS1Q86XX4 4008 aa13.98□□□□□ -0.17
CCDC130-209ENST00000588809 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
CCDC130-209ENST00000588809 SNRPGP15A8MWD9 76 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 ADAP1O75689 374 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 ID3Q02535 119 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 Q8NAQ8 132 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 CSNK1G2-AS1Q8NCQ2 148 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 PHLDA1Q8WV24 401 aaPredicted RBP13.97□□□□□ -0.17
CCDC130-209ENST00000588809 MFFQ9GZY8 342 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 FBXL17Q9UF56 701 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 FLVCR2Q9UPI3 526 aa13.97□□□□□ -0.17
CCDC130-209ENST00000588809 OR4E1P0C645 316 aa13.96□□□□□ -0.17
CCDC130-209ENST00000588809 IL7P13232 177 aa13.96□□□□□ -0.17
CCDC130-209ENST00000588809 LYZP61626 148 aa13.96□□□□□ -0.17
CCDC130-209ENST00000588809 C11orf45Q8TAV5 145 aa13.96□□□□□ -0.17
CCDC130-209ENST00000588809 VPS13DQ5THJ4 4388 aa13.96□□□□□ -0.18
CCDC130-209ENST00000588809 CENPXA8MT69 81 aa13.95□□□□□ -0.18
CCDC130-209ENST00000588809 CFDP00746 253 aaPredicted RBP13.95□□□□□ -0.18
CCDC130-209ENST00000588809 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
CCDC130-209ENST00000588809 OR4D5Q8NGN0 318 aa13.95□□□□□ -0.18
CCDC130-209ENST00000588809 COQ8AQ8NI60 647 aa13.95□□□□□ -0.18
CCDC130-209ENST00000588809 NDUFA13Q9P0J0 144 aa13.95□□□□□ -0.18
CCDC130-209ENST00000588809 PAIP2BQ9ULR5 123 aaKnown RBP13.95□□□□□ -0.18
CCDC130-209ENST00000588809 H3BMM0 161 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 MIFP14174 115 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 NANOS2P60321 138 aaKnown RBP13.94□□□□□ -0.18
CCDC130-209ENST00000588809 OR2F1Q13607 317 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 CNPY1Q3B7I2 92 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 WDR12Q9GZL7 423 aaKnown RBP13.94□□□□□ -0.18
CCDC130-209ENST00000588809 HRH4Q9H3N8 390 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 SLC45A2Q9UMX9 530 aa13.94□□□□□ -0.18
CCDC130-209ENST00000588809 STRAPQ9Y3F4 350 aaKnown RBP13.94□□□□□ -0.18
CCDC130-209ENST00000588809 LINC00854A0A1B0GVQ3 168 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 H3BP45 60 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 SOCS3O14543 225 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 DEFB4AO15263 64 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 HLA-DRB4P13762 266 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 ANXA7P20073 488 aaKnown RBP13.93□□□□□ -0.18
CCDC130-209ENST00000588809 POLR2GP62487 172 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC130-209ENST00000588809 ACOT7LQ6ZUV0 252 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 HLA-DRB4X5D2U9 266 aa13.93□□□□□ -0.18
CCDC130-209ENST00000588809 X6R8D5 127 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms