RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GGTLC1Q9BX51 225 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 MAP1LC3BQ9GZQ8 125 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 PXMP4Q9Y6I8 212 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
VMP1-204ENST00000587259 RBFOX3A6NFN3 312 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 AGPAT2O15120 278 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 APOC3P02656 99 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 SFTA3P0C7M3 94 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 FHITP49789 147 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 TAS2R45P59539 299 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 B2MP61769 119 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 GNB1P62873 340 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 WT1-ASQ06250 92 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 ZNF506Q5JVG8 444 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 ZNF562Q6V9R5 426 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 C16orf82Q7Z2V1 217 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 S100A7AQ86SG5 101 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 ZNF329Q86UD4 541 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 Q8N6K4 173 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 ABHD5Q8WTS1 349 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 TMEM170AQ8WVE7 144 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 TMEM190Q8WZ59 177 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 TMEM68Q96MH6 324 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 LINC00052Q96N35 136 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 MGST2Q99735 147 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 ASCL2Q99929 193 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 B9D2Q9BPU9 175 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
VMP1-204ENST00000587259 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
VMP1-204ENST00000587259 SLC35B3Q9H1N7 401 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 FBXL15Q9H469 300 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 THYN1Q9P016 225 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 F11RQ9Y624 299 aaKnown RBP6.11□□□□□ -1.43
VMP1-204ENST00000587259 ARL2-SNX15V9GYD0 113 aa6.11□□□□□ -1.43
VMP1-204ENST00000587259 NPIPB5A8MRT5 1133 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 M0QZK8 103 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 CXorf1O96002 111 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 HLA-DRB1P01911 266 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 AMY1AP04745 511 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 BCL2P10415 239 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 DEFA4P12838 97 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 S100A7P31151 101 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 EGFEM1PQ0D2K5 195 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 C9orf152Q5JTZ5 239 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 ACSM6Q6P461 480 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 SPSB3Q6PJ21 355 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 STPG3Q8N7X2 389 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 THAP8Q8NA92 274 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 OR10W1Q8NGF6 305 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 OR1L4Q8NGR5 311 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 ARPC1AQ92747 370 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 RASL11BQ9BPW5 248 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 VAX2Q9UIW0 290 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 LINC00527Q9UJ94 153 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 PITPNC1Q9UKF7 332 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 RNF24Q9Y225 148 aa6.1□□□□□ -1.43
VMP1-204ENST00000587259 TSSC4Q9Y5U2 329 aaPredicted RBP6.1□□□□□ -1.43
VMP1-204ENST00000587259 TRAV30A0A087WSZ9 112 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 LOC102723971A0A1B0GUV8 181 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 CGB1A6NKQ9 187 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 NCBP2LA6PVI3 153 aaKnown RBP6.09□□□□□ -1.43
VMP1-204ENST00000587259 MYOD1P15172 320 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 HIST1H1BP16401 226 aaKnown RBP6.09□□□□□ -1.43
VMP1-204ENST00000587259 DEFA5Q01523 94 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 GAMTQ14353 236 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 FXYD3Q14802 87 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 MRGPRG-AS1Q2M3A8 158 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 SOHLH1Q5JUK2 328 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 C10orf55Q5SWW7 151 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 FAM122CQ6P4D5 195 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 LCN15Q6UWW0 184 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 PQLC2Q6ZP29 291 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 RPP25LQ8N5L8 163 aaKnown RBP6.09□□□□□ -1.43
VMP1-204ENST00000587259 TMEM116Q8NCL8 245 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 GATAD1Q8WUU5 269 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 RAB24Q969Q5 203 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 MISP3Q96FF7 219 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 NOL4LQ96MY1 436 aaPredicted RBP6.09□□□□□ -1.43
VMP1-204ENST00000587259 PRR25Q96S07 402 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 TRGV9Q99603 122 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 SLC25A33Q9BSK2 321 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 SLC25A22Q9H936 323 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 GNG13Q9P2W3 67 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 SLC45A2Q9UMX9 530 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 PRELID1Q9Y255 219 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 MOB4Q9Y3A3 225 aa6.09□□□□□ -1.43
VMP1-204ENST00000587259 ZFP92A6NM28 416 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 TMEM250H0YL14 139 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 PDE6DO43924 150 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 GHRHP01286 108 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 CRYGCP07315 174 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 STAG3L2P0CL84 134 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 STAG3L3P0CL85 134 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 CTRB1P17538 263 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 CNTFRP26992 372 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 MEF2BQ02080 365 aaPredicted RBP6.08□□□□□ -1.44
VMP1-204ENST00000587259 PNRC1Q12796 327 aaPredicted RBP6.08□□□□□ -1.44
VMP1-204ENST00000587259 RHEBQ15382 184 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms